Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g3034 ATGGCTACCCTTGTTGTTCATAACCAAACTTCTGCTCAAGATGCTGAGGCTCTCCAACAGGCTTTTGAAGGATGGGGTGCTGATGACAAGAGCATTATAGCAATATTGGGTCACAGAAATAGAGCTGCGTACCGATGGATGTTGGAGCCTGCAGATCGTGATGCTGTTTTGGTGAATGTAGCAATCAAGAATGGCACCAAAGACTACCATGTGATTGCAGAGATTGCTTGTGTTCTATCAGCTGAAGAGCTCTTGGCAGTGAGGCGTGCCTATCACTACCGTTACAAGCGTTCCTTGGAGGAAGATCTTTTGGTTGGATTGGTGAGCACATTTAGGTATGAGGGAGATGAAATCAATGTAAAATTGGCACAAACTGAAGCAAATGTTCTTCATGAATCTGTCAAGGAGAAGAAAGGAAACTATGAAGAAGTCATCAGGATCCTTACTACAAGAAGCAAGACTCAGCTTGTGGCAACTTTCAACCGCTACAGAGATGAGCATGGAATTTCCATCAGTAAGAAATTGTTGGATCAAACATCTGATGACTTCCTTAGGGTGTTGCACACTGCTATTCGCTGCATCAATGACCATACAAAGTACTATGAAAAGGTTTTGCGCAATGCAATCAAGAAGTTTGGAACTGATGAGGATGGACTAAGCCGTGTGATTGTTACAAGGGCTGAGAAGGATCTGAAGAACATCAAAGAACTCTACTACAAGAGAAACAGTGTTCACCTTGAGGATGCAATTTCCAAAGAAACTTTTGGGGACTACAAGAAGTTCATCCTCACTCTGTTGGGGAAACGAGACTAA 813 0.4293 MATLVVHNQTSAQDAEALQQAFEGWGADDKSIIAILGHRNRAAYRWMLEPADRDAVLVNVAIKNGTKDYHVIAEIACVLSAEELLAVRRAYHYRYKRSLEEDLLVGLVSTFRYEGDEINVKLAQTEANVLHESVKEKKGNYEEVIRILTTRSKTQLVATFNRYRDEHGISISKKLLDQTSDDFLRVLHTAIRCINDHTKYYEKVLRNAIKKFGTDEDGLSRVIVTRAEKDLKNIKELYYKRNSVHLEDAISKETFGDYKKFILTLLGKRD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g3034 270 PANTHER ANNEXIN 40 270 - -
Aed1g3034 270 Pfam Annexin 54 103 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 Pfam Annexin 203 265 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 Pfam Annexin 127 188 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 SUPERFAMILY Annexin 8 268 IPR037104 GO:0005509|GO:0005544
Aed1g3034 270 ProSitePatterns Annexin repeat signature. 213 265 IPR018252 GO:0005509|GO:0005544
Aed1g3034 270 Gene3D Annexin 50 111 IPR037104 GO:0005509|GO:0005544
Aed1g3034 270 SMART annex3 66 107 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 SMART annex3 138 190 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 SMART annex3 213 265 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 Gene3D Annexin 120 195 IPR037104 GO:0005509|GO:0005544
Aed1g3034 270 PRINTS Annexin family signature 135 157 IPR001464 GO:0005509|GO:0005544
Aed1g3034 270 PRINTS Annexin family signature 205 226 IPR001464 GO:0005509|GO:0005544
Aed1g3034 270 ProSiteProfiles Annexin repeat profile. 196 267 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 PRINTS Plant annexin signature 85 99 IPR009118 -
Aed1g3034 270 PRINTS Plant annexin signature 181 199 IPR009118 -
Aed1g3034 270 Gene3D Annexin 1 49 IPR037104 GO:0005509|GO:0005544
Aed1g3034 270 ProSiteProfiles Annexin repeat profile. 121 192 IPR018502 GO:0005509|GO:0005544
Aed1g3034 270 PANTHER ANNEXIN 40 270 - -
Aed1g3034 270 PANTHER ANNEXIN 8 40 - -
Aed1g3034 270 Gene3D Annexin 198 268 IPR037104 GO:0005509|GO:0005544
Aed1g3034 270 PANTHER ANNEXIN 8 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g3034 Aed-Chr1 26375637 26380248 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g3034 1 26375637 26380248 Aed1g3034 1 26375637 26380248 ECH
Aed1g3034 1 26375637 26380248 Aed4g1519 4 20161848 20165068 PCT