Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2894 ATGGCCACCGAAAAGCTCAGAAGTTGTGCAAACTTTCTTGAGAACTCTAAACCCTACTTTGCCATGATTTCCTTACAATTTGGCTATGCAGGCATGAACATTATCACTAAGGTTTCCCTCAACCATGGCATGAGTCACTATGTACTTGTTGTTTATCGCCATGCCTTTGCCACTGCTGTCGTCACTCCATTTGCCTTCTTCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTTGCTCTACTTGGGCCAGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACATCCCCAACCTTCTCATGTGCAATGAGCAACATCCTTCCTGCCATCACTTTTGTGATGGCAGTTCTATGCAGGATGGAGAAGATCAACATGAAGAAAGTGAGATGCCAAGCCAAGGTGGTGGGAACATTGGTGACTGTGGCTGGGGCCATGTTGATGACCTTGTACAAAGGCCCTATAGTTGACATGGTTTGGACCAAACATCATGGGCAAATCCATAATAATAATAATGCAACAAATGCCACAACATATTCAGACAAGGATTGGTTCTTAGGCTCCATCTTCCTAATCATTGCCACCCTTGCCTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCATATATCTGCTTCATAGGCACTGTTCAAGCTACTGCTGTTACTTTTGTTATGGAACACAAGCCATCCGTTTGGACAATTGGTTGGGATATGAACTTACTTGCTGCTGCCTATGCTGGGATTGTTACATCAAGCATATCATACTATGTGCAAGGATTGGTAATTAAGAAGAAAGGGCCTGTTTTCGCAACAGCATTTAGCCCTCTGATGATGATCATTGTAGCCATCATGGGCTCCTTTATCCTTGCAGAGCAGATTTTTCTTGGAGGAATTCTTGGTGCCATCTTGATCGTTTTAGGCTTATACTCAGTTCTTTGGGGAAAGCACAAAGAACAAGTGAAGAAAGTGGCAGATATACCCTTGCCAATAAAGGGTGCTGCTATGGTTGATGGAATTCAAGGGTCACAAATTACTGATTACAATGATCAGAAATCCGATTCCAACATGTTCTCTTCACATATAATTAGTGTTCCTATCTCTGAGCCACCCATGAAATCTAACAATTAA 1197 0.4194 MATEKLRSCANFLENSKPYFAMISLQFGYAGMNIITKVSLNHGMSHYVLVVYRHAFATAVVTPFAFFFERKAQPRITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNILPAITFVMAVLCRMEKINMKKVRCQAKVVGTLVTVAGAMLMTLYKGPIVDMVWTKHHGQIHNNNNATNATTYSDKDWFLGSIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSYICFIGTVQATAVTFVMEHKPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIFLGGILGAILIVLGLYSVLWGKHKEQVKKVADIPLPIKGAAMVDGIQGSQITDYNDQKSDSNMFSSHIISVPISEPPMKSNN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2894 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Aed1g2894 398 Pfam EamA-like transporter family 196 335 IPR000620 GO:0016020|GO:0016021
Aed1g2894 398 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Aed1g2894 398 PANTHER WAT1-RELATED PROTEIN 12 363 - -
Aed1g2894 398 PANTHER WAT1-RELATED PROTEIN 12 363 IPR030184 GO:0016021|GO:0022857
Aed1g2894 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2894 Aed-Chr1 24329333 24333846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2894 1 397 Nodulin-like Gene Family AT5G07050 66.250 0.0 544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2894 1 24329333 24333846 Aed1g2894 1 24329333 24333846 ECH
Aed1g2894 1 24329333 24333846 Aed4g1455 4 19081688 19085581 PCT