Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2847 ATGTCTCATCCACACAAAGAAGCTAAACAAGAAAACCAGCACATGCACAACCATGAAGGACATGAAAGGATTGCACAACCTGTGTGCTCTCTAGGGGATTTTGGTTTAGCTAGAACTGTAATTGAAGACTCCTCATACTCCACAGACTGTGTTGGGAATCTGGCTTATATGGCACCAGAATACTTAGACTTTGGCAAAGTGTCAACTAAGACAGATGTGTATGCTTTTGGGGTGGTTCTACTACAGCTAATAACTGGAATGAGGACCACAGACAAACGAGCTAGACCATTACTAAAAGAATGGAAATGCCAATCACTTATTGATGGAAGGATGATCAATTCCCATGACTGCCATCAACTCTATTGGATGAGCCGTCTAGTTGGAAATTGTCTTCACAGTGATCCTCAAAAGAGATTGAATATGAGTACAGATCAAAATGCACACTCAGGGGATTGTGTTAAGAGTTCATTTGACATGATTCAAGCGCATGTGGTCAGAGCCTTAAATCAGATAGGCCAAGGCTGCAGCTGCATTGTGAGGCAAGATCACACGCTTGCCAGGTCAAGTCATTCTAATTCTAAGTCAAAAGATGATACAGAAGGCTCTTCTGAATCAGACGCTGGTGGAAGTGAAAGTATAGGTTGA 645 0.4217 MSHPHKEAKQENQHMHNHEGHERIAQPVCSLGDFGLARTVIEDSSYSTDCVGNLAYMAPEYLDFGKVSTKTDVYAFGVVLLQLITGMRTTDKRARPLLKEWKCQSLIDGRMINSHDCHQLYWMSRLVGNCLHSDPQKRLNMSTDQNAHSGDCVKSSFDMIQAHVVRALNQIGQGCSCIVRQDHTLARSSHSNSKSKDDTEGSSESDAGGSESIG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2847 214 Gene3D Transferase(Phosphotransferase) domain 1 4 151 - -
Aed1g2847 214 MobiDBLite consensus disorder prediction 187 203 - -
Aed1g2847 214 PANTHER TYROSINE KINASE FAMILY PROTEIN 162 192 - -
Aed1g2847 214 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g2847 214 Pfam Protein tyrosine and serine/threonine kinase 26 142 IPR001245 GO:0004672|GO:0006468
Aed1g2847 214 PANTHER TYROSINE KINASE FAMILY PROTEIN 30 145 - -
Aed1g2847 214 PANTHER OS01G0253100 PROTEIN 162 192 IPR045271 GO:0004714|GO:0006468
Aed1g2847 214 PANTHER OS01G0253100 PROTEIN 30 145 IPR045271 GO:0004714|GO:0006468
Aed1g2847 214 MobiDBLite consensus disorder prediction 186 214 - -
Aed1g2847 214 SUPERFAMILY Protein kinase-like (PK-like) 28 142 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2847 Aed-Chr1 23680219 23683610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2847 31 166 Receptor kinase-like Gene Family AT1G34210 33.113 1.02e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed1g2847 PK_Tyr_Ser-Thr 2.2e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2847 1 23680219 23683610 Aed4g1432 4 18829429 18835772 PCT