Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2833 ATGTCTTCCTTCAAATCCTACGGCAAAGTTGATGAGCACGAGCTAATGGCGTTGGAGGCAAAGAGGAAAACCCGAAAGAGAATCACAATCATAGGCCTCTCCTCAATAGTCCTAGCAAGTGTTATACTTGCTACTGTGTTTGGCATTGTCAGCACCACTCAAAACTCACAAGGTGCCAATGATGATGCTCCTAACAGTGTGACCAGTACTTCACTAAGGGCTGTTTGTGATGTGACTCTCTACAAGGACTCATGCTATAGCAGCCTTGGCTCTGCTGTGGTGGGCTCAGTGAATAATGTTCAGCCTGAGGAGTTGTTCATGTTGTCAATGAAGGTGGCTTTGTCTGAAGTGTCCAAAGCTGTTGAGTATTTCAATGATGATGGAGTTTTCAAAGGGTTGATGGAGTTAGAGGATAGCAGGACTAAGAAGGCTTTGAAAAATTGCAGGGAGCTTCTGGGTCTTGCGGTTGATCATCTGAATAGCTCTTTGACATCTGGGGGAAAGTCTTCACTTCTTGATGTTTTTGAGGATCTTGAAACATGGTTAAGTGCTGCAGAATGGCTTCATTCAAAAGATAGTAGTAGGAGGCTGCTTCTAGCAGAGGATAATTTGAGGAAAAAAGCTGACATTGTTGTGGCCAAAGATGGCAGTGGGAAATATAAAAAAATCTCTGATGCACTTAAACATGTCCCTAATAAGAGTAACAAGAGGACTGTGGTCTATGTGAAGAGAGGGGTTTACTATGAAAATGTGAGGGTAGAGAAGACCAAATGGAATGTGATGATCATTGGTGATGGTATGACTTCAACTATTGTATCTGGCAGCCTTAACTTTGTGGATGGAACACCAACATTTTCAACAGCAACATTTGCTGTATTTGGAAGAAATTTCATAGCCAGAGACATGGGTTTTCGGAACACTGCTGGTCCACAGAAGCACCAAGCAGTGGCACTAATGACAAGTGCAGATGAAGCAGTTTACTACAGGTGCCACATTGATGCATATCAGGACACACTCTATGCACATTCCAATCGCCAATTCTACAGAGAATGCAACATCTATGGCACTGTTGACTTCATATTTGGCAACTCTGCAGTTGTGATCCAAAACTGCAGCATTAGGCCAAAGCAACCAATGCATGGCCAGCAGAACACAATCACAGCACAAGGGAAAACTGACCCCAACATGAATACTGGAATCTCCATTCAACACTGCAACATTTCACCCTTTGGAAACCTGAGTTCTGTGCAGACATACCTTGGAAGGCCCTGGAAGAATTACTCAACCACTGTGTACATGAGGTCTAGGATGCAAGGCTTTGTGAACTCCAAAGGGTGGTTGCCGTGGACCGGGAACTCGGCGCCAGACACCATTTTCTATGCTGAGTTTCAGAATGTTGGACCTGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACTGTTATTAGTAGTAAACAAGCTAGCAAGTTTACTATCAAGGCTTTTCTACAAGGAGGCAAATGGATTTCTGCATCAGGTGCTCCATTTAAGTCTGATCTATGA 1551 0.4365 MSSFKSYGKVDEHELMALEAKRKTRKRITIIGLSSIVLASVILATVFGIVSTTQNSQGANDDAPNSVTSTSLRAVCDVTLYKDSCYSSLGSAVVGSVNNVQPEELFMLSMKVALSEVSKAVEYFNDDGVFKGLMELEDSRTKKALKNCRELLGLAVDHLNSSLTSGGKSSLLDVFEDLETWLSAAEWLHSKDSSRRLLLAEDNLRKKADIVVAKDGSGKYKKISDALKHVPNKSNKRTVVYVKRGVYYENVRVEKTKWNVMIIGDGMTSTIVSGSLNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADEAVYYRCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCSIRPKQPMHGQQNTITAQGKTDPNMNTGISIQHCNISPFGNLSSVQTYLGRPWKNYSTTVYMRSRMQGFVNSKGWLPWTGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLRTVISSKQASKFTIKAFLQGGKWISASGAPFKSDL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2833 516 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Aed1g2833 516 PANTHER PECTINESTERASE 186 514 - -
Aed1g2833 516 Pfam Pectinesterase 209 501 IPR000070 GO:0030599|GO:0042545
Aed1g2833 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 189 IPR035513 -
Aed1g2833 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 186 IPR035513 -
Aed1g2833 516 Pfam Plant invertase/pectin methylesterase inhibitor 72 185 IPR006501 GO:0004857
Aed1g2833 516 PANTHER PECTINESTERASE 5 185 - -
Aed1g2833 516 SMART PMEI_2 67 214 IPR006501 GO:0004857
Aed1g2833 516 CDD PMEI-like_3 74 185 - -
Aed1g2833 516 PANTHER PECTINESTERASE 186 514 - -
Aed1g2833 516 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 185 IPR006501 GO:0004857
Aed1g2833 516 PANTHER PECTINESTERASE 5 185 - -
Aed1g2833 516 SUPERFAMILY Pectin lyase-like 207 513 IPR011050 -
Aed1g2833 516 Gene3D - 204 516 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2833 Aed-Chr1 23536350 23539222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2833 7 516 Carbohydrate Esterase AT3G10710 52.993 0.0 607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2833 1 23536350 23539222 Aed4g1414 4 18548025 18550844 PCT