Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1947 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGACCAACAGAAAGTAACAGTTTTAGGTAGTGTGGATTCTGCAACTTTGATCAAGAAACTGGTGAGATCTGGTAAACATGCTGAACTCTGGTCTCAGAAAACAAATCAGAACCAAAAGCAGAAGAACAACAATGCTAAGGATGACAAGAACAAAGGGCAAAAGCAGCAGCAAGTACTGGTCAAGGGGCTTGAGGCCTTCAAAAGCCAGCAGAAATTTCCTGCTTTTAGTTCTGAAGAGGATGAATACTACTCTGAATATGATGACGAGGAGGACGACGAAGACGAAGAGATGCGGTTTCTGAGGGAGAAAGCGAATCAACTTCAAATGCTGAAGCAGCAAGCAGCTAATGCAAACAATGTGAGAAAAGGTATGGGAGCCATTGCAGCAGGAGGTGGCAACAATGGTAATAAGATGACCAGTGGTGGCAATGCCAATGGTGGCAAAAAAGGAGGCCCTAATCATAACATGGGAATGAAGGACAGTCCTAATGGTGGAGGGCTTGATCAGAAAACCATTGCAGCCCTTAAATTGAACAGTGGCCACATGGGTGGTGAAGGCCTCAACCTCAATCTTGGTGAAGCCAAAAGGGCCAATGACATTGGTGCTATGATGAATTTGGCTGGCTTTAATGGTAATGGTGGTAATGTTGGCAGTGCCACTGTTCTAGGGGGCAATAATAATAACTCAAATGGTTTGGGAGGTTTTCCTGTTCAGTCCAATAATAATAACATGATTCCAGGGTCCGCTGCAGCTTTTTCAAATGCTGGTCTTTCTGGTGGTGGCCAGTATCCACCTTCTCTGTTAATGAACATGAATGGCTTCAATAACCATCCATCTCCCTTGATGAACATGAACATGCAGGCCAGGCAAGCCATGCAGCAGCAACAACAACCTCAGATGATGTATCACAGGTCTCCTTTCATTCCCTCTAACACTGGCTATTACTACAGCAACAGTAGCTACAGCCCTGCACATTACTCCTACTCCTATGGTGGCTTGCCTAGTTACCCTTCTGGGGGTGCTGCTGCTGCTGATCATCACTCTGCAGCTCACATGTTCAGTGATGACAATACTACCAGCAGCTGTTTAATAATGTAA 1239 0.4423 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDADQQKVTVLGSVDSATLIKKLVRSGKHAELWSQKTNQNQKQKNNNAKDDKNKGQKQQQVLVKGLEAFKSQQKFPAFSSEEDEYYSEYDDEEDDEDEEMRFLREKANQLQMLKQQAANANNVRKGMGAIAAGGGNNGNKMTSGGNANGGKKGGPNHNMGMKDSPNGGGLDQKTIAALKLNSGHMGGEGLNLNLGEAKRANDIGAMMNLAGFNGNGGNVGSATVLGGNNNNSNGLGGFPVQSNNNNMIPGSAAAFSNAGLSGGGQYPPSLLMNMNGFNNHPSPLMNMNMQARQAMQQQQQPQMMYHRSPFIPSNTGYYYSNSSYSPAHYSYSYGGLPSYPSGGAAAADHHSAAHMFSDDNTTSSCLIM 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1947 412 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 412 - -
Aed1g1947 412 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Aed1g1947 412 Pfam Heavy-metal-associated domain 17 71 IPR006121 GO:0046872
Aed1g1947 412 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 412 - -
Aed1g1947 412 CDD HMA 16 75 IPR006121 GO:0046872
Aed1g1947 412 Coils Coil 130 167 - -
Aed1g1947 412 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Aed1g1947 412 Coils Coil 82 102 - -
Aed1g1947 412 MobiDBLite consensus disorder prediction 80 103 - -
Aed1g1947 412 Gene3D - 12 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1947 Aed-Chr1 16585655 16588400 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1947 1 16585655 16588400 Aed1g1947 1 16585655 16588400 ECH