Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1941 ATGGGAGCTGAGAGGAAATGGCTTTTCACTCTATTCAGCGCAGCATTCCTATCTCTCATGCTTATTTTGATGTCTTCTTTCTCTGCCTTTAGCACCCCAAAGGTTTTCCCTTCCCTTGTTCAGCATGGTTCTCACTACCCTCCAGCTTTTGCATACTTTATCTCTGGCGGCAACCAAGACAAGGACCGGATCTTGCGTTTGTTGTTGGCAGTTTACCATCCTAGGAATAGGTACCTCCTCCATCTTGGGAGGGATGCCAAGGATGAGGAGAGGCAGGCCCTGGTTGCTGCTGTGAGGGCAGTGCCGGTGATTCGCGCTTTTGGGAATGTTGATGTGGTTGGCAAGGCTGATTATGTCACCTACTTGGGATCCTCCAATGTTGCTATCACTCTTCGGGCTGCTGCCATTATGCTCAAATTGGATAGTGGCTGGAATTGGTTCATCACCTTGAGTGCACAGGACTATCCTCTCATCACTCAGGATGATATGTCCCATGTTTTCTCTTCTGTTAGGAGAGACCTCAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGAAAGATAGATTCCAACCTATTGTAGTTGATCCCGGACTATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAAAAGAGGCCCACGCCTGACGCATTCAAACTCTTTACAGGCAAATCTTTTCTCTCATGCCATTTGTTCACCATGGGTTACCTTGAGCCGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGGACCCTACTAATTTATCTCAAGAAGGCTACTTTCACTCAGTCGTTTGCAACGAGCCAGAATTTAAGAACACAACAGTAAATGGTGACTTACGATATATGATCTGGGACAATCCTCCGAAGATGGAACCGCTCTTCCTTAACGCCTCTGTTTACAATCAGATGGCAGAAAGTGGAGCCGCTTTTGCAAGACAGTTTCAACTTAACAATCCTGTGCTGGACATGATTGACGAAAAGATCCTCCAACGTGGTCGCCATCGAGTTACTCCAGGAGCGTGGTGCACCGGGCGGAGGAGCTGGTGGGTGGATCCATGCTCCCAATGGGGTGATGTCAATACTGTGAAACCAGGTCCTCAGGCTAAGAAGCTTGAAGGGTCTGTTTCTAACCTTCTTGATGACTGGAACTCACATAGCAATCAGTGTCAGTGA 1197 0.4703 MGAERKWLFTLFSAAFLSLMLILMSSFSAFSTPKVFPSLVQHGSHYPPAFAYFISGGNQDKDRILRLLLAVYHPRNRYLLHLGRDAKDEERQALVAAVRAVPVIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMLKLDSGWNWFITLSAQDYPLITQDDMSHVFSSVRRDLNFIDHTGDLGWKEKDRFQPIVVDPGLYLARRSQIFQATEKRPTPDAFKLFTGKSFLSCHLFTMGYLEPALSGVLHFWLGQFTSDPTNLSQEGYFHSVVCNEPEFKNTTVNGDLRYMIWDNPPKMEPLFLNASVYNQMAESGAAFARQFQLNNPVLDMIDEKILQRGRHRVTPGAWCTGRRSWWVDPCSQWGDVNTVKPGPQAKKLEGSVSNLLDDWNSHSNQCQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1941 398 Pfam Core-2/I-Branching enzyme 50 301 IPR003406 GO:0016020|GO:0016757
Aed1g1941 398 PANTHER OS01G0121800 PROTEIN 2 398 - -
Aed1g1941 398 PANTHER GLYCOSYLTRANSFERASE 2 398 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1941 Aed-Chr1 16549900 16553914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1941 1 398 Glycosyltransferase AT1G71070 63.591 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1941 1 16549900 16553914 Aed1g1941 1 16549900 16553914 ECH