Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1934 ATGCCTGCGTTCGTGTTGGTGGAATATCTCTCCGTGTCTCTTTCCCAGAATCGCGCGAAACACGTCAATCCCCCTTCAAACGCAGTGTTTGAGCCAAACAAGCTGGGCGTGGCAGAATTCGACCTTTTTCCCATTAGCATGGCCATTCCCTACCCTCATTTCATCGCTACCGAGAAAGCCGCCATGGACGCCGGCCTCCTCCTCCCCTCATCCTCCCCCTCCGTCATCTTCACCCAAGACGATTTGAAGAAAATCGCCGCCTACAAGGCCGTGGAGTACGTCGAATCCGGCATGGTCCTCGGCCTTGGCACAGGCTCCACCGCCAAGCACGCCGTCGACCGCATCGGCGAGCTTCTCCGCCAGGGAAAGCTCAAAAACATCGTCGGAATCCCCACCTCCACCAAAACCCACGAACAAGCCCTCTCCCTCGGCATCCCCCTCTCCGATCTCGACTCCCACCCCGTCGTCGATCTCGCCATTGACGGCGCCGACGAGGTTGACCCCTTCCTCAACCTCGTCAAGGGCCGCGGCGGCTCCCTCCTCCGGGAAAAGATGGTCGAGGGCGCATGCAACAAGTTTATCGTCATCGTCGACGAGTCCAAGCTCGTCAACTACATCGGTGGTAGCGGCTTGGCCATGCCCGTTGAGATTATTCAGTTCTGTTGGAAGTTCACCGCCGCCAGGTTGCAGAAGCTCTTCGAGGAGGCTGGGTGCGTCGCAAAGCTGAGGACTTTTGGGGAAAAGAAGGAGCCTTATGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCGAGAGGAGTATTGGGGATTTGAAGGCTGCAAGTGACGCTATTTTGCAGCTTGCAGGGGTTGTGGAGCATGGCATGTTTCTTGATATGGCCACCACTGTCATTGTTGCAGGGGAGTTAGGGTTGACGGTGAAGAATAAGAAATAG 939 0.5591 MPAFVLVEYLSVSLSQNRAKHVNPPSNAVFEPNKLGVAEFDLFPISMAIPYPHFIATEKAAMDAGLLLPSSSPSVIFTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSTKTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACNKFIVIVDESKLVNYIGGSGLAMPVEIIQFCWKFTAARLQKLFEEAGCVAKLRTFGEKKEPYVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNKK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1934 312 Gene3D - 82 303 - -
Aed1g1934 312 SUPERFAMILY NagB/RpiA/CoA transferase-like 78 228 IPR037171 -
Aed1g1934 312 TIGRFAM rpiA: ribose 5-phosphate isomerase A 82 305 IPR004788 GO:0004751|GO:0009052
Aed1g1934 312 Gene3D - 205 289 - -
Aed1g1934 312 Hamap Ribose-5-phosphate isomerase A [rpiA]. 79 309 IPR020672 GO:0004751|GO:0009052
Aed1g1934 312 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 47 311 - -
Aed1g1934 312 PANTHER ISOMERASE, PUTATIVE-RELATED 47 311 - -
Aed1g1934 312 CDD RPI_A 82 302 IPR004788 GO:0004751|GO:0009052
Aed1g1934 312 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 128 303 IPR004788 GO:0004751|GO:0009052
Aed1g1934 312 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 211 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1934 Aed-Chr1 16511400 16512460 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1934 1 16511400 16512460 Aed1g1934 1 16511400 16512460 ECH