Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1923 ATGAGTAATCCCAGCGAAGTTGAACCGTTATCCAAAGCTGCAAGAGCAGCAGAAGATCTTTACCATGTTCGAGACACTTATTTCCCACCCAACCCCGATGACAGAATCTCAAAGTTGCAACACGAGTCCGATCTCGCTCTTCAACTCCTCGATTCCACTCCCCCAGAACAAAGAAAATCACCTATGCAACGCGCAACATTTGAATATCTTAGAGGGAAGATGTTGGATGTGTTTCCTGACTATAGGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTTAAATTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAGAAAGGAGATTTAACTGCTGCAAAGAACTGCCTCAGTCTTGCATTAGACAAGGGTCCTAACAAAAAAATTCTGTGTCAATTATCAATGCTTAAAAGAAAAATGTCTCAAGATAATCTTGGAAATGCATGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATACCAAACTTTTACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAAAAATGGAGTCCAATCCAGATTTATATTTTAATAGTGCTACTGTTAACAAATATTTAGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAATTTACTTGACAAGGTGGACAATCTTTTGAAGGGACATGTCAGAGCTAAGCGAATGGCATCTTTGGCATCATCATTGGTTGCTGTTGATTTGAAATCGTCATACAGAAGAGTTACCATAGACCTTCTGTCGGAGGGTCCAAATAGAGCTCTTGCAGTAGAGGGGAAAGTTTTTTTCTTTGTTAGGAGTGAGAGTGTTGCTCCCCTATACTATTTTCTTTGTGATTCAAATCAATCTTGCTTTGTTCTCTCGATTTATGGCGTACATACTGATGTGATTAAAGAAGGAGATCAGCTAACATTGCTTGACCCTTATTTTCGTGACGTTGATTTGTCCTGGAAGGAGAAGCATTACCAGTTCAAATCTATACGCCTGGATTTCTATGAACAAGTGCTTGTAAATGGAAAAGCTTTGACTCCGCAACAAGCTCTTCGTACGTCGTTCTATGCTCAACATAAACCCTGA 1164 0.3995 MSNPSEVEPLSKAARAAEDLYHVRDTYFPPNPDDRISKLQHESDLALQLLDSTPPEQRKSPMQRATFEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLSLALDKGPNKKILCQLSMLKRKMSQDNLGNACLTSFFVTGAWDHTKLLHSLKAYQNAEKDEKMESNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVNLLDKVDNLLKGHVRAKRMASLASSLVAVDLKSSYRRVTIDLLSEGPNRALAVEGKVFFFVRSESVAPLYYFLCDSNQSCFVLSIYGVHTDVIKEGDQLTLLDPYFRDVDLSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQALRTSFYAQHKP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1923 387 Gene3D Tetratricopeptide repeat domain 149 246 IPR011990 GO:0005515
Aed1g1923 387 Gene3D Tetratricopeptide repeat domain 4 148 IPR011990 GO:0005515
Aed1g1923 387 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 8 311 - -
Aed1g1923 387 Pfam Tetratricopeptide repeat protein 5 OB fold domain 268 379 IPR032076 -
Aed1g1923 387 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 8 311 - -
Aed1g1923 387 SUPERFAMILY TPR-like 83 222 IPR011990 GO:0005515
Aed1g1923 387 Gene3D - 247 386 IPR038645 -
Aed1g1923 387 SMART tpr_5 100 133 IPR019734 GO:0005515
Aed1g1923 387 SMART tpr_5 190 223 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1923 1 16454432 16461228 Aed1g1923 1 16454432 16461228 ECH