Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1922 ATGGCCGCGTCGTCGCAGTCGTCCTCCGCCGCGGCAAACATCATGCTGGCGATCTTCGAGAAGAAGACGAACAACGTAGATCTGTACCGGCCCCTCCGCAACTACGTGGCCTTCCACTACTCTGAGCGAGAGGCGCAGAGCCTCGAGGACGATCTCCAAACCCTTAAGCAACTCCGCTCCGACGTTGAGCGGCACTCCGATCCCTCCCTCCCCGCCCGGCGCGACCTCCTCCAAAGCTACTTCAAAGCCCTCTGCCTCGTTGAGACTCGCTTCCCTATCTCCCCCGACCCCGACCACGTCAACGCCCTCACCTTCCTCTGGTTCGACGCCTTCAAGCCCAAGCAGAAGGCCTCTCAGCAGAACATCCACCTCGAGAAGGCCTCCGTTCTCTTCAATTTGGCCGCCGTCTACAGCCAGATTGGTTTGTCCTATGATCGCAACACCGTCGACGGCCGCCGCCAGGCCTCGCACGCCTTCATTGCCGCTGCTGGCTCCTTCGCCTTCCTCCGCGACAACGCCTCCATGAAGGCCTCTGTTGGGAGCTCCACCACTGTTGATCTGTCCGTGGAGTGCGCCGGGATGCTTGAGAAGCTCATGCTCGCGCAGGCGCAGGAGTGCGTCTTCGAGAACACCATTGCCAAAGGGAGCACTCCTGGTGTCTGTGCCAAGATCTCTAGGCAGGTTGGGATATATTACGAGGAAGCTTTAGCTGCGCTGAATGTTGCGCCCCTGAGTCAGCATTTCGATAAGTCTTGGATAGTTCACGTGCAGTTGAAGGCGGCTCTGTTCTTTGCGGAAGCTTCTTATAGGTATGGATTGGAGCTGCATGATAAGGAGGAGATAGCAGAGGAGATTGCACGTCTGCGGAGTGCTGTTAATGTGCTGACTGATGCAAAGAAGAGCTCTAAGGGTGCTGCGGCACAAATTCTAGATGCAATTGGCAAGTTAGAGGCCAATATTAACCGGAACCTTGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACCTCATGAGAGTTCCTTCGCCAAGTTCACTACCACCTCTTCCAGCATTTTCTATGGTGAAGTCCATGGTGATGAATGAGGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCAAGTCTTGTTCCGGACAACAGTGCAAAGGCCCTCTCCCGGTATACTGAAATGGTAGATGACGTTATAAGAACACAGGCTGAAAAGTTGCAGCAGGCTAGTGAGCTAACCCGTGTTAGGCTTAAGGAAATGGAACTGCCAGATTCCATTCTTGCTTTGGAAGGAAATTTTACTCTGCCAACAACTCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAAGACCTAAGGAGGGTGAATCAAGAGTTGCTGGTCCAGACTGAGGAACTGTTGCAGAAGGAAGCAAGAGAAGATTCTCAATTTAGAAGCCAATTTGGCACAAAGTGGACCAGGCCTCAATCAAGCACCTTGACCAAGAACTTGCAGGATAGGTTAAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCAGACAGTGATGGTCGGATTGAGCGTTCGGTTAGAGAACACTCAGCACTCATGTCGATCCTTGACGCCCGTCCGATTGAATCTGCACTTCCAAGCTTGGCAAGGCCGATTATGTCTTTTGATCAAAATGAAGATGCCATTGTGGGGTCTCTCAAGCAAAGCTTGAGGCAACTAGAAACTCTAGGAGCTCAAAGGGCTGGTCTTGAAGATATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACATCCACCGGTTCTTATGATGATCTCTTCAAGAAGGAGATAGCAAAATATGACCATATTTGTGAAGAAATAGCTCAAAATATCGAGGCACAAGAGCAATTGTTGCTGCAGATCCAGGCTCAAAATGATGAGTTCTCTGTTATCTTCAATCTTGAAGATTACAAAGGCAGGTCACATTTAGTTTTTCTTGTATTTATTTTAGCTTCACGTGAAAAAGCCTACAAGCAGATTGAAGCTGCCATAGCAAAATTTAGAGAAATAAAGGACAACATCAATGAGGGGTTAAAATTCTATGTCACACTGCAAGATGCAATCACAAATGTAAAGCAGCAGAGCAACGATTTTGTAATGACACGGAACATCCAGTGCCGAGACATGATTGATGATGTTCAGAGACAAGTTGCTGGTCTGAGTTTCCAGGATAACAAAAACACAGGTGGTTTTAACAACAACTACCCTTCAGTGGGAAGCCAAAATCAAAGAACCACTGCACAGACAGATCCTCCTCGTCCACAAGCACCTTATTATCAGCAGCCAGTTGAGCAGCAGCCACCAGTTCCTACCTATGGCCATCATCCCCCTCCCCCATATGGTGGTGGTCCTGCACATCATCAGCCTCCACCTCCATACCACATTCCACCATCAACTTCTCCATACCCACCCCCTCAGCTCCATCAGCGGCCACCGGCAAACCATGAGTATGGCCAACCAGCATATCCCGGATGGCGTGGTCCGTACTACAACGCACAAGCACAGCAACCTGGTTCTGTTCCGCAGCCTCATTATACCAATCCATCTCCATACCCTCCACCTCATCAAAGTGGCTACTATAAGCAGCAATAG 2658 0.497 MAASSQSSSAAANIMLAIFEKKTNNVDLYRPLRNYVAFHYSEREAQSLEDDLQTLKQLRSDVERHSDPSLPARRDLLQSYFKALCLVETRFPISPDPDHVNALTFLWFDAFKPKQKASQQNIHLEKASVLFNLAAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASVGSSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLSQHFDKSWIVHVQLKAALFFAEASYRYGLELHDKEEIAEEIARLRSAVNVLTDAKKSSKGAAAQILDAIGKLEANINRNLERAVKENDRVYLMRVPSPSSLPPLPAFSMVKSMVMNEVLDASKEKMFASLVPDNSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTTLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAADSDGRIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFKKEIAKYDHICEEIAQNIEAQEQLLLQIQAQNDEFSVIFNLEDYKGRSHLVFLVFILASREKAYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCRDMIDDVQRQVAGLSFQDNKNTGGFNNNYPSVGSQNQRTTAQTDPPRPQAPYYQQPVEQQPPVPTYGHHPPPPYGGGPAHHQPPPPYHIPPSTSPYPPPQLHQRPPANHEYGQPAYPGWRGPYYNAQAQQPGSVPQPHYTNPSPYPPPHQSGYYKQQ 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1922 885 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 7 874 - -
Aed1g1922 885 Coils Coil 278 298 - -
Aed1g1922 885 Coils Coil 45 65 - -
Aed1g1922 885 Coils Coil 450 477 - -
Aed1g1922 885 Pfam ALIX V-shaped domain binding to HIV 430 726 IPR025304 GO:0005515
Aed1g1922 885 ProSiteProfiles BRO1 domain profile. 13 408 IPR004328 -
Aed1g1922 885 Coils Coil 577 597 - -
Aed1g1922 885 CDD BRO1_Alix_like_1 15 370 - -
Aed1g1922 885 MobiDBLite consensus disorder prediction 745 885 - -
Aed1g1922 885 Coils Coil 626 646 - -
Aed1g1922 885 MobiDBLite consensus disorder prediction 777 832 - -
Aed1g1922 885 Pfam BRO1-like domain 15 393 IPR004328 -
Aed1g1922 885 Gene3D alix/aip1 like domains 422 715 - -
Aed1g1922 885 SMART BRO1_2 14 398 IPR004328 -
Aed1g1922 885 Gene3D alix/aip1 like domains 10 375 IPR038499 -
Aed1g1922 885 Coils Coil 675 695 - -
Aed1g1922 885 MobiDBLite consensus disorder prediction 745 776 - -
Aed1g1922 885 CDD V_Alix_like_1 376 724 - -
Aed1g1922 885 PANTHER PCD6 INTERACTING PROTEIN-RELATED 7 874 IPR045251 GO:0071985
Aed1g1922 885 Gene3D alix/aip1 in complex with the ypdl late domain 376 654 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1922 1 16448973 16454190 Aed1g1922 1 16448973 16454190 ECH