Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1916 ATGATATCCACATGGGAAACTGACTTATACTTGGACAAGGTTTTATTGTTCGATGAGGGAAATGCATTGTATCATGGGGATAACTGCAAAAAGAATGAGCAAAAGCAAAGGCCTTTCATACCAACTCAAATCTTTCAAGCACTCTATCTCTCAATTGGATTGGTAGTACTAGTAGGAAAGAAAAGCATGGAAGAGAATCTATTAGCAAAACAAAATGAGAAGCAGAAAGTTACATGGAATGGTTTGGGTGAAGAAATGAAGGGGATCATTCGCATAGCAGTGCCTATGGTGGTTGTGACTGCTACCCAGTATTTATTGCAGGTTGTGTTAATCATGATGGTTGGTCACCTCAATGATGATCTCTATCTCTCCAGTGCCGCCTTAGCCATCTCTCTTGCCACGGTTACTGGTTTCAGTGTTCTTACAGGAATGGCTAGTGGACTGGAAACTATTTGTGGACAGGCTTATGGAGCTCAGCAATATGAAAAAGTTGGAGTGCAAACATACACTGCTATATTTTCTCTCACAATCGTTTGTCTTCCACTGACTTTTATTTGGATCAGCATGAATGAGATACTAGTTTTCATAGGCCAGGACCCTCTAATGGCACATGAAGCAAGAGCATTCTTAATCTGGCTTGTTCCAGCACTTTTTGCACATGCAGTTATGCAGCCGTTAGTTCGATATTTTCAAATGCAAAGTCTGCTTCTTCCCATGCTTATAAGTTCCTGTGTCACTCTTTGTATCCATGTACCCCTTTGTTGGGCTTTGGTGTTCAAGACTGGACTGAATAATGTTGGTGGAGCATTAGCAATGAGCATTTCAATATGGTTAAATGTGACTTTTCTAGGATTATACATGAGATACTCTCCTGCATGTGCAGAAACCCGTGCACCCATTTCTATGGAGCTGTTCCAAGGAATTTGGGAGTTCTTTCGGTTTGCTATACCTTCTGTAGTGATGATTTGCCTTGAATGGTGGTCATTTGAGCTGCTTATCTTGCTGTCTGGGCTGTTGCCAAATCCACAACTTGAAACTTCAGTTCTATCCATTTGTCTCAACACTATTACCACTCTCTTTTCAATACCTTTTGGAATTGCCGCTGCAGCAAGCACAAGGATTTCAAATGAATTAGGAGCAGGGAATCCACATGCTGCCCATGTTGCTGTGTTGGCCGCAATGTCTTTTGCAATCATGGAGACAGCTATTGTTAGCACAACCCTCTTTGTCTGTCGTGGTGTTTTTGGTTATATTTTCAGTAATGAGAAGGAAGTTGTTGATTATGTCACTGTCATGGCTCCTCTGATTTGCATATCTGTTATACTGGACAGCATACAAGGTGTTCTCACAGGGGTTGCTAGAGGTTGTGGATGGCAACACATAGGGGTTTATGTCAATCTAGGGGCATTCTACCTCTGTGGGATTCCTGTTGCTGCTGCACTGGCATTTTTGGCAAAAATGGGAGGAAAAGGACTTTGGATTGGTGTACAACTCGGTTCTTTTGTTCAATGTATTCTACTTTCTACCATAACAAGCTGCATAAATTGGGAACAACAGGCTATCAAGGCAAGAAAGAGGTTATTTGATAGTGAAATATCAGCAGACAATAGATTAGTATGA 1620 0.4136 MISTWETDLYLDKVLLFDEGNALYHGDNCKKNEQKQRPFIPTQIFQALYLSIGLVVLVGKKSMEENLLAKQNEKQKVTWNGLGEEMKGIIRIAVPMVVVTATQYLLQVVLIMMVGHLNDDLYLSSAALAISLATVTGFSVLTGMASGLETICGQAYGAQQYEKVGVQTYTAIFSLTIVCLPLTFIWISMNEILVFIGQDPLMAHEARAFLIWLVPALFAHAVMQPLVRYFQMQSLLLPMLISSCVTLCIHVPLCWALVFKTGLNNVGGALAMSISIWLNVTFLGLYMRYSPACAETRAPISMELFQGIWEFFRFAIPSVVMICLEWWSFELLILLSGLLPNPQLETSVLSICLNTITTLFSIPFGIAAAASTRISNELGAGNPHAAHVAVLAAMSFAIMETAIVSTTLFVCRGVFGYIFSNEKEVVDYVTVMAPLICISVILDSIQGVLTGVARGCGWQHIGVYVNLGAFYLCGIPVAAALAFLAKMGGKGLWIGVQLGSFVQCILLSTITSCINWEQQAIKARKRLFDSEISADNRLV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1916 539 Pfam MatE 317 478 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1916 539 Pfam MatE 95 255 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1916 539 TIGRFAM matE: MATE efflux family protein 95 493 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1916 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 84 523 - -
Aed1g1916 539 CDD MATE_eukaryotic 85 522 IPR045069 GO:0042910|GO:1990961
Aed1g1916 539 PANTHER PROTEIN DETOXIFICATION 14 84 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1916 Aed-Chr1 16420272 16425569 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1916 1 16420272 16425569 Aed1g1916 1 16420272 16425569 ECH
Aed1g1916 1 16420272 16425569 Aed7g0262 7 1847376 1851202 ECH