Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1915 ATGGAAGAAAGTCTACTAAAGCTGAAACATGAAGAAGAAAGAGTAACATGGGGTGTTTTTAGTGAAGAAATGAAAAGGATCTGTTACATAGCAGGGCCTATGGTGGCAGTGGTTTGTTCCCAATTTTTGTTGCAAGTTGTTTCAACTATGATTGTTGGTCATCTCGGTGAGCTTTATCTCTCTAGCGCCGCCTTAGCCATTTCCTTAGCAGGGGTCACTGGTTTCAGTTTTCTTATGGGAATGGCTAGTGGACTAGAAACAATTTGTGGACAGGCTTATGGAGCTCAGCAATATCAGAAAGTTGGAATGCAAACATACACTGCTATGTTCTCTCTCATTTTGGTCTGTATTCCCGTTTCCCTGCTTTGGATCAACATGGAAACCGTACTAGTTTTCATAGGCCAGGACCCTCTAATTTCCCATGAAGCAGGCAAATTCACAATGTGGCTTGTTCCAGCACTTTTTGCATATGCAGTTCTACAGCCTTTAGTTAGATATTTCCAAATCCAAAGTTTGCTTCTTCCCATGTTTGCAAGTTCTTGTGTCACACTCATCATTCATGTACCTCTTTGTTGGGTCTTGGTTTTCAAGACAACACTCGGTAATGTTGGTGGAGCATTGGCAGTGAGCATTTCAATATGGTCAAATTTGATTTTTCTTGGATTATACATGAGATACTCTTCTGCATGTGCAAAAACCCGGGCACCTATTTCGTTGGAGCTGTTCAAAGGAATGTGGGAGTTCTTTCGTTTTGCTATCCCTTCTGCAGTAATGGTTTGCCTTGAATGGTGGTCATATGAGCTGCTTGTATTGCTCTCAGGGCTGTTACCAAATCCACAACTTGAAACTTCAGTTCTATCCGTTTGTCTTAACACCATTTCAACTCTCTATATGATACCCTTTGGAATCGGTGCGGCAGCAAGCACAAGGGTTTCAAATGAATTAGGAGCTGGGAATTCACATGCTGCCCGTGTTGCTGTGTTAGCCGCAATGTCTCTTGCAGTGATAGAGACAAGTATAGTGAGTGCAACACTCTTTGCCTGCCGCAATTTTTTTGGTTATATTTTCAGCAATGAGAAGGAAGTTGTTGATTATGTCACTGTCATGGCCCCTCTGGTTTGTATATCTGTTATACTAGACAGCATACAAGGGGTTCTCACAGGGATTGCCAGAGGTTGTGGATGGCAACATTTAGGGGTTTATGTGAATCTAGGGGCCTTCTACCTATGTGGCATTCCAGTGGCTGCCTTACTTGCATTTTTGGTGCAACTTGGAGGAAAAGGACTTTGGATTGGTATTCAAAGTGGTGCTTTTGTTCAAACTCTTCTACTTTCTATCATAACAGGTTGCATAAGTTGGGAAAAGCAGGCGATAAAGGCAAAAACGAGGTTATTTGATGGTCAATTTTCAGCAAACAATATATTGGTATGA 1431 0.4186 MEESLLKLKHEEERVTWGVFSEEMKRICYIAGPMVAVVCSQFLLQVVSTMIVGHLGELYLSSAALAISLAGVTGFSFLMGMASGLETICGQAYGAQQYQKVGMQTYTAMFSLILVCIPVSLLWINMETVLVFIGQDPLISHEAGKFTMWLVPALFAYAVLQPLVRYFQIQSLLLPMFASSCVTLIIHVPLCWVLVFKTTLGNVGGALAVSISIWSNLIFLGLYMRYSSACAKTRAPISLELFKGMWEFFRFAIPSAVMVCLEWWSYELLVLLSGLLPNPQLETSVLSVCLNTISTLYMIPFGIGAAASTRVSNELGAGNSHAARVAVLAAMSLAVIETSIVSATLFACRNFFGYIFSNEKEVVDYVTVMAPLVCISVILDSIQGVLTGIARGCGWQHLGVYVNLGAFYLCGIPVAALLAFLVQLGGKGLWIGIQSGAFVQTLLLSIITGCISWEKQAIKAKTRLFDGQFSANNILV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1915 476 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1915 476 Pfam MatE 254 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1915 476 PANTHER PROTEIN DETOXIFICATION 8 464 - -
Aed1g1915 476 TIGRFAM matE: MATE efflux family protein 33 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g1915 476 CDD MATE_eukaryotic 23 459 IPR045069 GO:0042910|GO:1990961
Aed1g1915 476 PANTHER MULTIDRUG RESISTANCE PROTEIN 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1915 Aed-Chr1 16415634 16419547 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1915 1 16415634 16419547 Aed1g1915 1 16415634 16419547 ECH
Aed1g1915 1 16415634 16419547 Aed7g0260 7 1829685 1832149 ECH
Aed1g1915 1 16415634 16419547 Aed5g2624 5 26927103 26929590 ECH