LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed1g1911	ATGGAGCAAGAGAATCACAAAATCAACGCAGTGAATTTGCTTCGAAGCCGAATCTGTGATCCCAAATTCATCTTCATCGATGATTCTCCAGACACCAACTACAGCAAGCTAAAATTCATGATATCGAGTTCGGTGACGGAGGCGTGCAACAATTCTATTCTTCTTCTCGGTCCTCGTGGCTCCGGCAAGAATGCGGTTTTGGAACTTGTCATTCAAGATTTGTTTCAAGAGTATCCGGACTCGATTTCAGTGATAAGGTTGAATGGGCTTTTACACAGTGATGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAACGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATGCTAAAGGAATGCGGATTGGCACATAAAACAGTAATTTTTGTCCTGGATGAGTTTGACCTGTTTGCTCAGGGTAAACAGAGATTACTCTATAGCTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGGGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCCTACCACCTTCAATAGAAGATTCACAAAAGTTACTGATGCACATGCTTACATTACCAATTGATTCAAGATTTCCACATGATTATGCTGTTGAATTTAACAGAAAGGTCCAAAATATTATAGAAGATAGAAGGTTCAAAGAAACCCTCAATAAATATTTAAATGTTGACTCCTCTGTCAAACATTTTCTGAGGTTCCTATTCTGTGCAGTCTCTTGTATGGATTTGCAGACTGGGTTCCTGTCTCGGGAGAACTTTGAAATTGCATTTTTAAGTATCCAAAGGAAGCCCAAACTGGAATGTTTAATAAATTGCTCCATTTTAGAACTTCAAATTTTAGTTTGCATGAAGAGATTGGAAGTCAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGAAAGAGTATAATAGTATTATCCCGGATTCTGACCTACATGCAAAGCATGTCCGCTTAAGGGCATTTGAACAACTTATACATCGTGAATTGATATGTTTCACAGACAATAGAGGACAGAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTACTGAACTACATCAAGAACTAAGAGCAAAGTCACGCCCTGTAAGTTATCCGACAGAATTAGCCCACCTGTATATTGATTATGTGCCAGATTGA	1260	0.3897	MEQENHKINAVNLLRSRICDPKFIFIDDSPDTNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLFQEYPDSISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKTASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHMLTLPIDSRFPHDYAVEFNRKVQNIIEDRRFKETLNKYLNVDSSVKHFLRFLFCAVSCMDLQTGFLSRENFEIAFLSIQRKPKLECLINCSILELQILVCMKRLEVKEQSLCNFNSVMKEYNSIIPDSDLHAKHVRLRAFEQLIHRELICFTDNRGQSLSVEFRPVKLLISSTELHQELRAKSRPVSYPTELAHLYIDYVPD	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed1g1911	419	Pfam	AAA ATPase domain	34	168	IPR041664	-
	Aed1g1911	419	PIRSF	ORC4	2	415	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Aed1g1911	419	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 4	8	409	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Aed1g1911	419	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	44	262	IPR027417	-
	Aed1g1911	419	CDD	AAA	51	199	-	-
	Aed1g1911	419	Gene3D	-	31	205	IPR027417	-
	Aed1g1911	419	Pfam	Origin recognition complex (ORC) subunit 4 C-terminus	214	394	IPR032705	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed1g1911	1	400	Core DNA Replication Machinery Family	AT2G01120	62.379	0.0	514

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed1g1911	1	16392566	16396267	Aed1g1911	1	16392566	16396267	ECH