Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1910 ATGAGAACAATGGTTGCCACTTTCTCATATCCAGCCTCTACCTACCTAGTAAGATGTTGTTCCATGAGAGAAAACCATGACCAGGTTAAGCAGCAATTGAACAGCAGCATCAGAACTAATGGGAGTTTTAGGTCCCCAGTTAAAGTTGAGTCACTAAGCCAAACAATTTCAACAACAACAACCACTCTTGGTCAAGCTGTTACAGTTGGTGAAAATGTTCTGCGCCAAAACATCCCAACAAAGAAGCAATTGGTTGATCCTCATCGTCAAGGGCTCATCATTGAAGGTGGAGTTGGTTATAGACAGACTATTGTCATTAGGTCCTATGAAGTTGGAGCTGATAAAACTGCCACACTTGAGAGCATCCTCAATCTTCTTCAGGAAACAGCACTAAACCATGTTTGGATGTCTGGACTGCTCAGTGATGGGTTTGGAGCAACACATGGAATGGTGAGGAACGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTACTATCCCATCTGGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGCATCAGGCAAGAATGGAATGCGGCGTGACTGGCTGATAAGATGCCAAGCCACGGGCCACATTTTTGCACGTGCAACAAGCACGTGGGTGATGATGAACCGTAAAACAAGACGTCTCTCCAAAATGCCAGAAGAGGTGAGAGCAGAAGTTTCACCTTGGTTTATAGAGAAGCAAGCAATCAAGGAAGATGTTCAAGAAAAAATAGTCAAATTGGACAAAGAGGCCAAATACATGAATTCTGACTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAACATGTTAACAATGTGAAGTATCTAAGATGGATGCTAGAGACCATCCCGGACCAAATTCTAGAGGGTCACCAATTATCTGGTATCACACTAGAATACAGAAGGGAATGTGGAAGCTCAGATATAGTTCAATCACTATGTGAACCCGAAGAGGATGAAATACTTCATGGTGTGGTGGAACCAGATTACTGCACAAATCTTCTCAATGGGTTGTCATTAGCATCATCAGATATTATAAATGGTAGTGGAGTCCTTACTTCCCTTGACCAAAGGCCATTAAGGTATACACACCTTTTACAAATCAAAGGAGAGAAACAAAACGATGAAATTGTCAGAGGAAGGACTACATGGAAGAGGAAGATTGCTACAATGCCATTTTCCACTTAG 1212 0.4233 MRTMVATFSYPASTYLVRCCSMRENHDQVKQQLNSSIRTNGSFRSPVKVESLSQTISTTTTTLGQAVTVGENVLRQNIPTKKQLVDPHRQGLIIEGGVGYRQTIVIRSYEVGADKTATLESILNLLQETALNHVWMSGLLSDGFGATHGMVRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIRCQATGHIFARATSTWVMMNRKTRRLSKMPEEVRAEVSPWFIEKQAIKEDVQEKIVKLDKEAKYMNSDLKPKRSDLDMNQHVNNVKYLRWMLETIPDQILEGHQLSGITLEYRRECGSSDIVQSLCEPEEDEILHGVVEPDYCTNLLNGLSLASSDIINGSGVLTSLDQRPLRYTHLLQIKGEKQNDEIVRGRTTWKRKIATMPFST 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1910 403 Pfam Acyl-ACP thioesterase 99 392 IPR002864 GO:0006633|GO:0016790
Aed1g1910 403 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 7 396 - -
Aed1g1910 403 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 260 400 IPR029069 -
Aed1g1910 403 CDD 4HBT 100 216 - -
Aed1g1910 403 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 99 246 IPR029069 -
Aed1g1910 403 Gene3D Hotdog Thioesterase 93 399 - -
Aed1g1910 403 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 7 396 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1910 Aed-Chr1 16381197 16383461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1910 84 403 Acyl Lipid Metabolism Gene Families AT1G08510 47.975 4.91e-99 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1910 1 16381197 16383461 Aed1g1910 1 16381197 16383461 ECH