Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1907 ATGGCCATGGCGTCTGCAAAGCTTAACACGCTGTCTTCCCATTGGATCGCCCACAACTCCTTCTCTCCCCGCCGCGGATCCTCTTCCCGCCGAGTCTCTCTTCCGATCCGCGCTTCTTCTTACCAGCATGAACTCGTCCAAACCGCCAAATCTATTGCATCTCCTGGGCGTGGAATTCTTGCAATTGATGAATCAAACGCAACATGTGGGAAGCGTTTAGCGTCCATTGGATTGGACAACACCGAGTTGAATCGCCAGGCATATAGGCAATTACTGCTGACCACACCTGCCCTTGGTGAATACATCTCTGGTGCTATTCTTTTTGAAGAAACCCTTTACCAGTCAACAACTGATGGAAAGAAATTTGTGGATTGCCTTCGCGATCAGAACATTGTGCCCGGAATCAAAGTTGATAAGGGTCTGGTCCCTCTTCCAGGGTCAAACAATGAGTCCTGGTGCCAAGGGTTAGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGTGCTCGATTCGCCAAGTGGAGGACAGTTGTTAGCGTTCCATGTGGTCCTTCTGCATTAGCTGTTAAGGAAGCAGCGTGGGGACTTGCACGTTATGCTGCTATCTCTCAGGACAACGGTCTTGTGCCAATCGTAGAACCTGAAATTCTTCTTGATGGAGACCACCCAATTGAGAGGACGCTGGAAGTGGCCGAGAAGGTCTGGTCAGAGGTCTTCTTCTATTTGGCTGAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCTGAACACAAGGAAAAGGCTTCTCCAGAAACCATTGCCAAAAATACTCTAACAATGCTTAGAAGAAGAGTTCCTCCCTCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAAGTGGAAGCAACACTAAATCTGAATGCAATGAACCAAAGTCCCAACCCATGGCATGTGTCTTTCTCATATGCACGAGCTCTTCAGAACACCGTGCTTAAGACATGGCAAGGACACCCTGAGAATGTGGAAGCTGCTCAAAAGGCCCTTTTGGTGCGTGCTAAAGCAAACTCCTTGGCTCAACTTGGAAGATACTCTGCCCAGGGTGAGAGTGAAGAGGCCAAGAAGGGAATGTTTGTCAAGGGCTATACCTACTAA 1167 0.4824 MAMASAKLNTLSSHWIAHNSFSPRRGSSSRRVSLPIRASSYQHELVQTAKSIASPGRGILAIDESNATCGKRLASIGLDNTELNRQAYRQLLLTTPALGEYISGAILFEETLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVLFEGILLKPSMVTPGAEHKEKASPETIAKNTLTMLRRRVPPSVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGHPENVEAAQKALLVRAKANSLAQLGRYSAQGESEEAKKGMFVKGYTY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1907 388 Gene3D Aldolase class I 28 387 IPR013785 -
Aed1g1907 388 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 249 259 IPR029768 -
Aed1g1907 388 SUPERFAMILY Aldolase 35 388 - -
Aed1g1907 388 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 21 388 - -
Aed1g1907 388 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 21 388 IPR000741 GO:0004332|GO:0006096
Aed1g1907 388 CDD FBP_aldolase_I_a 44 368 - -
Aed1g1907 388 Pfam Fructose-bisphosphate aldolase class-I 44 388 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1907 Aed-Chr1 16350946 16353523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1907 39 388 Miscellaneous Gene Families AT3G52930 54.520 1.05e-130 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1907 1 16350946 16353523 Aed1g1907 1 16350946 16353523 ECH