Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1900 ATGGAGAAGGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTCTGTCTATCCTGTGACGCGAAGGTGCATTTAGCAAATGCACTGTCTGGCCGGCACCTCCGGAACCTTGTCTGTAACTCATGCGGATACCATCTTGCTTATGTTCTGTGTTTGGATCACAAGATGTTGATATGTCGTGACTGTGATCAAAAGTTGCACAATGTTTCTTTGCCACATAAGAAACGAGCTATCAGAAGTTTCATTGGTTGCCCTTCTGCTAAGGACTTTGCAGCAATCTGGGGGTTTGAATCGAATGAGATTGAAAACAGTCACAGTCACAGTCACAGTCAGGATCAGTTTGATTCAGTTTCTTGTGTTTCTGCAGATTTCAATGTTGCACAAGTTTCAGGAAAGCCTGGCATTCTTCAAACCAGCAGGGTCCCTTCAATGCTTTCTGGGGGATCAACCAGTCAACAAGATCAGATATTGTACAGTGATCAAGTGCGACAAACTATTCTGCATCAGATTATTGATTTAAAATGGCTTCAACAAAATGAGGAGATTGATTATCCTGCAAAGATCAATAGGCTACAAGAAAAAGATTTATCTCCTTCAGTGTATCACACTCTTAAGAAGTTGGACGAAAAATTCAATGAGCAAGCACAAAGTTCCCAGGATCTTGCTACCAATGTTCTGGAAAAAGACTGTCCCATTGTGGAGCTGAATCCTGAAACATTGCCTTCTACGTATTCTCAACTTGACAATTTATCTTCTTCTTCAATTATCGATCTTCCTTTGCATGGAGAGTTGTTGTGGACATGCAGAAGTCCACTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGCGAAGAACTTGTTTGTCAAGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAATATTGCTTGATCATCAAGATATCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTAACAAGTCAGATATTGACAATGCAAGTGCAATGGAGGATTCTTCAGCAGCTGCATCCATTACTATGTTCCAATCTGATCATGACAACCAGGATATGAATCCTCTCAGCCAGTACTGTCCAAGAAGCATGGATCCTGCACATACAATTCTACCATTTGATTCAACTATACCATTCTCTGTTTTGAGATTCAATGAAGAAAGCAGTTGCACTAGCCATGATGACACTGCCCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCGGGTAGTTAA 1317 0.407 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRNLVCNSCGYHLAYVLCLDHKMLICRDCDQKLHNVSLPHKKRAIRSFIGCPSAKDFAAIWGFESNEIENSHSHSHSQDQFDSVSCVSADFNVAQVSGKPGILQTSRVPSMLSGGSTSQQDQILYSDQVRQTILHQIIDLKWLQQNEEIDYPAKINRLQEKDLSPSVYHTLKKLDEKFNEQAQSSQDLATNVLEKDCPIVELNPETLPSTYSQLDNLSSSSIIDLPLHGELLWTCRSPLQSNQLWSQNIQDLGICEELVCQDDFNIPDVDLTFQNFEELFGGDQDPIRILLDHQDISCSSLEKDKSVNKSDIDNASAMEDSSAAASITMFQSDHDNQDMNPLSQYCPRSMDPAHTILPFDSTIPFSVLRFNEESSCTSHDDTALSPYSEGKAYSGS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1900 438 SMART bboxneu5 1 47 IPR000315 GO:0008270
Aed1g1900 438 SMART bboxneu5 48 87 IPR000315 GO:0008270
Aed1g1900 438 CDD Bbox1_BBX-like 4 44 - -
Aed1g1900 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Aed1g1900 438 MobiDBLite consensus disorder prediction 418 438 - -
Aed1g1900 438 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Aed1g1900 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1900 Aed-Chr1 16283217 16286425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1900 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 38.554 3.43e-63 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1900 1 16283217 16286425 Aed1g1900 1 16283217 16286425 ECH