Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1896 ATGGTTTTTGAAAGGGAGAAAAAGGTAATAAAACTGCTTTTCCCTTTTAATAAACCCACGCGCCTTCTCCTTACTGTGATTTTGAAATTGGCCTTCCGAGACACGAATCTTGATTCCAGTCTTCATTTCCGCTTCTTTCTTTCTTTCTCCTTCCGCTACCTCGAATCTCGTGCACGTGCTTTTGCAGTTGCAGCAAAAAAAATGCCAGAAATTCAGTTGGGTATGCATACTATTAGATCACATGGAACTAGAGTGGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGATCATCGATGCTGTCTTGAATATAATTGAGCCATTTCAACGTTTTGTTGGAGATGGGATGATGGCAGACCTTAGATACCCATTGAAAGCTAATACAATTCCCTTTTGGACTGTTCCGATAATAGCAATATTGTTACCACTGGCTGTTTTTCTCATTTACTATTTCATTCGTAAGGATGTCTATGACCTCCACCATGCTATACTGGGCCTTCTATTTTCTGTACTCATTACTGCGGTGATGACTGATGCTATCAAGGATGCTGTTGGACGGCCAAGGCCAGATTTCTTCTGGCGCTGTTTCCCTGATGGAAAAGGGGTGTTTGATCCATTAACAAGTAGTGTTCTGTGTACTGGAGATAAGGGTGTTATTAAGGAAGGGCACAAAAGTTTCCCCAGTGGGCATACCTCTTGGTCCTTTGCTGGTCTGGTTTATCTTGCTTGGTATCTATCTGGAAAACTTAAGGCATTTGATCGCAGGGGGCATGTTGCAAAGCTCTGTCTTGTTTTCTTACCAATCCTGGTGGCAGCTATGATTGCTGTCTCACGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGCTCTTATAGGGATGATAATTGCTTCCTTTTGTTACTTACAATTCTTTCCACCTCCTTATGACATAGATGGTTGGGGACCTCATGCATATTTCCAGATGTTGGCTGAATCTCGTAATGGTGGTCAGGTTTCTAACGTGAATAATGAGATTCATCAAGTGCAATCTGCTGAGCTTCAGGCAGTATCTTTGTATATCCCACAGCAAGGCAATAGCTGGGACTCAAGCCCCATGTTAGGTGCATCCCAAAATGTAAGAACACACTGA 1152 0.4227 MVFEREKKVIKLLFPFNKPTRLLLTVILKLAFRDTNLDSSLHFRFFLSFSFRYLESRARAFAVAAKKMPEIQLGMHTIRSHGTRVARIHMHDWLILLLLVIIDAVLNIIEPFQRFVGDGMMADLRYPLKANTIPFWTVPIIAILLPLAVFLIYYFIRKDVYDLHHAILGLLFSVLITAVMTDAIKDAVGRPRPDFFWRCFPDGKGVFDPLTSSVLCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLAWYLSGKLKAFDRRGHVAKLCLVFLPILVAAMIAVSRVDDYWHHWQDVFAGALIGMIIASFCYLQFFPPPYDIDGWGPHAYFQMLAESRNGGQVSNVNNEIHQVQSAELQAVSLYIPQQGNSWDSSPMLGASQNVRTH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1896 383 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 88 316 IPR036938 -
Aed1g1896 383 SMART acid_phosph_2 170 308 IPR000326 -
Aed1g1896 383 CDD PAP2_containing_1_like 124 311 - -
Aed1g1896 383 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 68 364 - -
Aed1g1896 383 Pfam PAP2 superfamily 167 312 IPR000326 -
Aed1g1896 383 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 86 317 - -
Aed1g1896 383 PANTHER LIPID PHOSPHATE PHOSPHATASE 68 364 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1896 Aed-Chr1 16237694 16242036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1896 68 357 Lipid Metabolism Gene Families AT1G15080 74.138 8.03e-158 443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1896 1 16237694 16242036 Aed1g1896 1 16237694 16242036 ECH