Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1895 ATGGCGTCGCGCGGTTTCTTTTCATTCCTAAGATTTTGGCCATCGTCTCAGGGTCAGGGAGGGATGAGGCAGCAAGTTGACCCCTTGGCTCATACAATAAAGTCCCATGGATCATCACTTGCAAGAAAACACGTTCGTGATTGGCTTATATTGCTGCTTCTCATAGTGATAGAGATTGTCCTTTTTGTCATTCATCCTTTTAAACGCTTTGTGGGAAGGGACATGCTGGAAGACCTCAGATATCCTATGAAAGAAAACACCGTCCCCGTTTGGGCTGTTCCTTTATATGCGGTTCTGTTGCCAATGGCTGTTTTTCTTCTCTTCTACATGCGCAGGAGATGTTTGCTGTTTGCTGTTTTGATAACTGGAGTCTTCACCGATGCAATAAAAAATGCAGTTGGCCGGCCTCGCCCAGACTTCTTTTGGCGTTGCTTCCCCGATGGAGTAGAGAGTTATGATAGATGGGGAGGTGTGGTATGTCATGGCAAGGCTAGCGATATAAAAGAAGGACACAAGAGTTTCCCTAGCGGCCATACATCATGGTCCTTTGCAGGTCTAGGTTTTCTGTCTCTGTACCTATCGGGGAAGATTAAAGCTTTTGATCGGAAAGGGCACGTGGCAAAATTATGCATTGTGTTTCTTCCTCTACTTGTTGCTAGCTTAGTTGCAATCTCTCGAGTGGATGACTATTGGCACCATTGGCAAGATGTGTTTGCCGGAGCCATTCTAGGGCTTGTTGTGGCAACCTTTTGCTATACGCAGTTCTACGCTGCGCCCTATAGTGATGAAGGATGGGGTCCATATGCATATTTCCGGGCAATGGAGGAATCACGAAGCAATGCAAACAATAGCCGGGAATTACCTGTTGGGCAGGCCATGGTGGAACCGGTTACGAATCAAGAAGCAATTAGGAGAAATGGTGATAATAGCTTTACCCCTTACTCTTACCGTAGCCCAACCTTGGAAGCCATGGAAATGGGACAAAAGCCCTAG 993 0.4663 MASRGFFSFLRFWPSSQGQGGMRQQVDPLAHTIKSHGSSLARKHVRDWLILLLLIVIEIVLFVIHPFKRFVGRDMLEDLRYPMKENTVPVWAVPLYAVLLPMAVFLLFYMRRRCLLFAVLITGVFTDAIKNAVGRPRPDFFWRCFPDGVESYDRWGGVVCHGKASDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDRKGHVAKLCIVFLPLLVASLVAISRVDDYWHHWQDVFAGAILGLVVATFCYTQFYAAPYSDEGWGPYAYFRAMEESRSNANNSRELPVGQAMVEPVTNQEAIRRNGDNSFTPYSYRSPTLEAMEMGQKP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1895 330 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 19 327 - -
Aed1g1895 330 PANTHER LIPID PHOSPHATE PHOSPHATASE 19 327 IPR043216 GO:0006644
Aed1g1895 330 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 40 264 - -
Aed1g1895 330 SMART acid_phosph_2 112 252 IPR000326 -
Aed1g1895 330 CDD PAP2_containing_1_like 79 255 - -
Aed1g1895 330 Pfam PAP2 superfamily 114 257 IPR000326 -
Aed1g1895 330 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 43 258 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1895 Aed-Chr1 16230345 16234333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1895 1 327 Lipid Metabolism Gene Families AT2G01180 59.706 1.15e-143 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1895 1 16230345 16234333 Aed1g1895 1 16230345 16234333 ECH
Aed1g1895 1 16230345 16234333 Aed3g0085 3 681860 686539 ECH