Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1892 ATGCGTGGTGGTGGCGGCGGTGAAGTCGAAGTGAAAAGAGTGTTTATTGGAGCAGGATGCAACAGAATAGTGAACAACGTTTCATGGGGTGCTTCTGGTTTGGTCTCTTTTGGAGCTCACAACGCCGTTGCTATTTTCTGCCCCAAGAGTGCTCAAATTTTGACTACTCTCCCGGGTCATAAGGCAGTTGTGAATTGCACCCACTGGCTACCTTCCAGCAAGTTTCTGTTTAAAGCAAAACAATTGGAGCAGCACTATTTGCTATCTGGAGATGCAGATGGTGCTATTTTTTTGTGGGAACTGTCCCTTGCTGATGGGAAGTGGAGGCAAGTGTTACAGCTGCCACAATCACACAAGAAAGGTGTTACATGCATTAGTGGAATTATGGTTTCTCAAACTGAGGCAATGTTTGCATCTACTTCTTCAGATGGCACGGCTTGTGTATGGGAACTTGTATTTCCAATGACTGGCAGCGGTGACTGTAAATTATCGTGCCTGGATTCGTTTTCTGTTGGTTCTAAATCTATGGTAGCCCTATCATTAGCTGAACTGCCTGGAGATAGTGGGCAAATTGTCCTTGCGATGGGAGGATTGGATAACAAGATTCACCTTTATTGTGGTGGAAGGACAGGAAAGCTTGTACATGCATGTGAGTTAAAAGGGCATACAGATTGGATCCGGAGTTTGGACTTCTCATTACCTATAAGCATCAATGGGGAAGTAAACAATATTTTTCTGGTTAGTTCATCTCAGGATAAAGGCATACGAATTTGGAAGATTGCATTACGCAGCTCTATGTCCAATGGACATGGCATATACAAGAAAGGAGAAATAAGCTTATCATCCTATATAGAAGGTCCTGTACTTGTGGCTGGTTCGTCTTCTTTCCAGATATCCTTAGAATCTCTTTTAATTGGACATGAGGATTGGGTATATTCAGTAATGTGGCAACCCCCTTTGGTTGCATCCATGGAAGGGAATGCCTATTATCAACCACTAAGTATCTTGTCTGCATCTATGGACAAGACTATGATGATATGGCAACCTGAAAAGACTTCTGGTGTCTGGATGAATGTGGTCACTGTTGGGGAACTAAGCCACTGTGCTCTGGGGTTCTATGGTGGCCATTGGAGCCCAAATGGAGATTCAATTTTAGCACATGGATATGGTGGATCTTTCCATCTTTGGAAAAATGTTGGTAATGATGATTGGCTACCACAAAAGGTTCCCTCTGGTCATTTTGCATCAGTGACTGATATTGCATGGGGTAGATCTGGTGATTATATTATGTCCATTAGTCATGATCAGACAACTAGAATTTATGCTCCATGGAAAGTTGAGGCTCCTCTCTCTAATGGAGAATTTTGGCATGAAATGGCTCGCCCTCAAGTTCATGGACATGATATAAATTGTATGGCAATTATTCACAGTAAGGGGAATCATCGCTTTGTCTGTGGAGCTGACGAAAAGGTTGCCAGAGTGTTTGAAGCCCCGTTATCATTTTTGAAGACATTAAATAATGCCACTTTGCAGTCCTGTTCTTCCGATGATATCATGGGAGATGTCCAGATTTTGGGTGCAAATATGTCAGCTCTTGGACTATCACAGAAACCTATATATGTTCAAGCTGTACATGAGGCCACTGAAAGAAGTGGGATTGATGGACTTGACACCCTTGAAAATATTCCTGATGCCATTCCAACTGTGTTCACTGAACCTCCAATTGAAGATCAACTGGCTTGGCATACACTTTGGCCTGAATCACATAAACTATATGGTCATGGAAATGAGCTATTTTCTTTATGCTGTGATCATAAGGGTGAGCTTGTTGCTTCTTCATGCAAGGCCCAGTCTGCAGCTGTTGCAGAGGTATGGCTTTGGCAAGTGGGTTCATGGAAAGCAGTTGGCCGCTTGCAGTCCCACAGCTTAACAGTGACACAGATGAAGTTCTCACATGACGACAACTTTCTTTTGACTGTCTCAAGGGATCGCCAGTTCTCTGTTTTTTCAATCACAAGAACAGGCACTGGTGAAATTAGTTATAGTCTTCTTGCAAGGCAAGAGGGGCACAAGCGGATTATCTGGTCATGTTCTTGGAATCCACATGGTCACGAATTTGCAACAGGTTCACGGGATAAGACAGTGAAAATCTGGACCATAGAGAGGGAGTCTGTCAGGCAGCTTATGTCTTTACCTCAATTTACGAGTAGCGTGACAGCATTATCTTGGGTTGATCTCCGACATCAGAGGAATAATGGACTTCTAGCTGTTGGAATGGAAAATGGCCAAATAGAATTGTGGAATCTGTTTTATAACAGAGCAGATGATGGGAGCATAGCAGCACCAGGTTTGGCTGCTTCACTTGCTGTACGTATAGATCCTTTTATATGCCATGCATCTACTGTAAACCGTCTAGCATGGAAGAAAAATGAGGATGATCACACGAGTATGCAACTTGCTTCTTGTGGAGCTGATAATTGTGTAAGAGTGTTTGATGTATCTGTTGAGTAA 2511 0.4297 MRGGGGGEVEVKRVFIGAGCNRIVNNVSWGASGLVSFGAHNAVAIFCPKSAQILTTLPGHKAVVNCTHWLPSSKFLFKAKQLEQHYLLSGDADGAIFLWELSLADGKWRQVLQLPQSHKKGVTCISGIMVSQTEAMFASTSSDGTACVWELVFPMTGSGDCKLSCLDSFSVGSKSMVALSLAELPGDSGQIVLAMGGLDNKIHLYCGGRTGKLVHACELKGHTDWIRSLDFSLPISINGEVNNIFLVSSSQDKGIRIWKIALRSSMSNGHGIYKKGEISLSSYIEGPVLVAGSSSFQISLESLLIGHEDWVYSVMWQPPLVASMEGNAYYQPLSILSASMDKTMMIWQPEKTSGVWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGNDDWLPQKVPSGHFASVTDIAWGRSGDYIMSISHDQTTRIYAPWKVEAPLSNGEFWHEMARPQVHGHDINCMAIIHSKGNHRFVCGADEKVARVFEAPLSFLKTLNNATLQSCSSDDIMGDVQILGANMSALGLSQKPIYVQAVHEATERSGIDGLDTLENIPDAIPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHKGELVASSCKAQSAAVAEVWLWQVGSWKAVGRLQSHSLTVTQMKFSHDDNFLLTVSRDRQFSVFSITRTGTGEISYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWTIERESVRQLMSLPQFTSSVTALSWVDLRHQRNNGLLAVGMENGQIELWNLFYNRADDGSIAAPGLAASLAVRIDPFICHASTVNRLAWKKNEDDHTSMQLASCGADNCVRVFDVSVE 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1892 836 Gene3D - 4 178 IPR015943 GO:0005515
Aed1g1892 836 Gene3D - 406 519 IPR015943 GO:0005515
Aed1g1892 836 Gene3D - 292 405 IPR015943 GO:0005515
Aed1g1892 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 219 268 IPR001680 GO:0005515
Aed1g1892 836 SUPERFAMILY WD40 repeat-like 12 323 IPR036322 GO:0005515
Aed1g1892 836 PRINTS G protein beta WD-40 repeat signature 246 260 IPR020472 -
Aed1g1892 836 PRINTS G protein beta WD-40 repeat signature 335 349 IPR020472 -
Aed1g1892 836 PRINTS G protein beta WD-40 repeat signature 706 720 IPR020472 -
Aed1g1892 836 SUPERFAMILY WD40 repeat-like 189 770 IPR036322 GO:0005515
Aed1g1892 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 638 671 IPR001680 GO:0005515
Aed1g1892 836 PANTHER ELONGATOR COMPLEX PROTEIN 2 8 835 - -
Aed1g1892 836 Pfam WD domain, G-beta repeat 218 259 IPR001680 GO:0005515
Aed1g1892 836 Pfam WD domain, G-beta repeat 406 441 IPR001680 GO:0005515
Aed1g1892 836 Pfam WD domain, G-beta repeat 688 718 IPR001680 GO:0005515
Aed1g1892 836 Pfam WD domain, G-beta repeat 52 99 IPR001680 GO:0005515
Aed1g1892 836 Pfam WD domain, G-beta repeat 115 149 IPR001680 GO:0005515
Aed1g1892 836 Gene3D - 185 291 IPR015943 GO:0005515
Aed1g1892 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 687 728 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 403 442 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 724 768 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 631 670 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 50 100 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 358 397 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 107 150 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 210 259 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 584 628 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 680 719 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 297 348 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 788 832 IPR001680 GO:0005515
Aed1g1892 836 SMART WD40_4 452 496 IPR001680 GO:0005515
Aed1g1892 836 PANTHER WD REPEAT-CONTAINING 8 835 - -
Aed1g1892 836 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 687 721 - -
Aed1g1892 836 Gene3D - 680 836 IPR015943 GO:0005515
Aed1g1892 836 Gene3D - 577 679 IPR015943 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1892 1 16207871 16213938 Aed1g1892 1 16207871 16213938 ECH