Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1863 ATGCCGGCGAAGGACGACGGCTCCGACAAGGAGAAGTGCCTCGATCTCTTTCTGAAGATCGGCTTAGACGAGCGCACAGCTAGAAACACCGTCGCCAACAACAAAGTCACCACCAATCTTACATCTGTCATCAATGAGGCTGGTGTTACTGATGGATGCAGCCGAACAGTTGGAAATCTTCTTTACACGGTTGCAACGAAGTACCCTGCAAACGCCTTGCCGCATCGCCCAACATTACTACAGTACATTGTCTCGTTAAAGGTGAAAACAACAGCACAGTTAGATGCAGCATTTTCATTTCTTGCTACCACGGCCTTGGAGAATCTTGATTTGAACAAGTTTGAAGAAGCTTGTGGTGTTGGCATTGAGGTTTCGACAGAAGATATCAAACAAGCTGTTAATGAAGTTGTTGAGGAGAACAAGGCTACAATTTTGGAGCTACGTTATCGAACAAATGTGGGTGAGTTGCTTGGGAATGTGCGCAAGAGGCTGCCATGGGGTGATTCAAAAGTTGCCAAGCAACTTGTTGATGCAAAACTATATGAACTACTTGGTGATCGGACAGAAGCAGATAATGAAAAGCCTTCTAAAAAGAAGAAGGAGAAACCTGCTAAAGTAGAGGATAAGGAAGCACCTGTTGCTACTCCTGAAGAAGACCTTAATCCGTTTTTAATATTCCCTAATCCAGAGGAAAATTTTAAGGTGCATACTGAAGTGCCTTTTAGTGATGGTAGTATTTTGAGATGTTGCAATACAAGGGCGCTTCTTGACAAACACTTAAAAGAAACAGGTGGAAAAGTTTTGACCCGCTTTCCACCTGAACCTAATGGATATTTGCATATTGGTCATGCAAAAGCAATGTTTATTGATTTTGGGTTGGCAAAAGACAGGGATGGAGGTTGCTATCTGAGGTATGATGACACAAATCCTGAAGCAGAAAAGAAAGAGTATATTGATCACATTGAAGAAATTGTCCAGTGGATGGGTTGGAAACCATTCAAGATTACTTACACAAGTGATTACTTCCAAGAATTGTATGAATTAGCAGTGAAGCTCATAAAAAGGGGTCATGCTTATGTTGATCATCAGACACCTGATGAAATAAAGGAGTCTAGGGAGAAGAAATTGAACAGTCCTTGGAGAGACAGACCAATTTCAGAGTCATTGAAGCTCTTTGAGGATATGAAAAATGGCATTATAGAAGAAGGAAAAGCCACACTGAGAATGAAGCAAGACATGCAGAGTGATAACTACAATATGTATGACCTTATTGCATATAGAATTAAGTTTACTCCACACCCTCATGCTGGAGACAAATGGTGTATCTACCCAAGTTATGATTATGCTCACTGCATTGTGGATTCTCTAGAGAATATCACACATTCTCTGTGTACACTTGAATTTGAGACACGTCGTGCATCATACTATTGGTTGTTGCATGCTTTAGGCATTTACCAACCTTATGTATGGGAATATTCAAGGTTGAATGTCTCTAACACAGTTATGTCAAAGCGTAAGCTAAATCGTCTAGTTACAGAGAAGTGGGTTGATGGGTGGGATGATCCTCGTTTGATGACACTAGCTGGTTTGCGGCGAAGAGGCATGACCTCAACTGCAATCAATGCTTTTGTCCGAGGAATTGGAATAACTAGAAGTGATGGCACTTTGATTTCTGTGGAACGCCTTGAATATCATGTTAGGGAAGAATTAAACAAAACAGCTCCTCGCGCAATGGTTGTCCTACATCCTCTAAAGGTTGTTATTACTAATCTTGAAGCCAACTCAGCAATTGAGGTAGATGCAAAGAAATGGCCTGATGCTCAAGCTGATGATGCTTCTGCTTTCTACAAGATTCCATTTTCCAATGTTGTATATATTGATCATTCGGACTTCCGGATGCAAGATTCCAAAGATTATTATGGCCTTGCTCCTGGGAAATCTGTGATACTAAGATATGCATTTCCTATAAAGTGCACTGAAGTTATTCTAGCTGATGATAATGAGACAATTGTTGAAATTCAAGCTGAGTATGATCCTTCAAAGAAGACCAAGCCTAAGGGGGTTCTCCATTGGGTTAATCAACCTTCTCCTGGAGTTGATCCATTAAAGATGGAAGTCAGATTGTTTGAGAGGCTATTCCTATCAGAGAATCCTGCTGAACTTGAAAACTGGCTTGGCGATTTAAACCCTAATTCCAAAGTGATAATTCCCAATGCATATGGTGTGTCCTCCCTACAGAATGCGAAAGTTGGGGACAATTTCCAATTTGAAAGATTAGGCTATTTTGTGGTTGACCGGGACTCTACATCAGAAAAACTTGTTTTTAATAGGACTGTCACCTTAAAGGACAGCTATAGCAAAGGTGGAAAGTAG 2373 0.4088 MPAKDDGSDKEKCLDLFLKIGLDERTARNTVANNKVTTNLTSVINEAGVTDGCSRTVGNLLYTVATKYPANALPHRPTLLQYIVSLKVKTTAQLDAAFSFLATTALENLDLNKFEEACGVGIEVSTEDIKQAVNEVVEENKATILELRYRTNVGELLGNVRKRLPWGDSKVAKQLVDAKLYELLGDRTEADNEKPSKKKKEKPAKVEDKEAPVATPEEDLNPFLIFPNPEENFKVHTEVPFSDGSILRCCNTRALLDKHLKETGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRDGGCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWKPFKITYTSDYFQELYELAVKLIKRGHAYVDHQTPDEIKESREKKLNSPWRDRPISESLKLFEDMKNGIIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGMTSTAINAFVRGIGITRSDGTLISVERLEYHVREELNKTAPRAMVVLHPLKVVITNLEANSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIDHSDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVILADDNETIVEIQAEYDPSKKTKPKGVLHWVNQPSPGVDPLKMEVRLFERLFLSENPAELENWLGDLNPNSKVIIPNAYGVSSLQNAKVGDNFQFERLGYFVVDRDSTSEKLVFNRTVTLKDSYSKGGK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1863 790 PANTHER OS05G0182800 PROTEIN 13 789 - -
Aed1g1863 790 Gene3D - 7 122 IPR042558 -
Aed1g1863 790 Gene3D - 123 192 IPR042559 -
Aed1g1863 790 CDD GlnRS_core 266 576 - -
Aed1g1863 790 Gene3D Ribosomal Protein L25; Chain P 578 697 IPR020056 -
Aed1g1863 790 SUPERFAMILY Nucleotidylyl transferase 266 580 - -
Aed1g1863 790 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 574 765 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Aed1g1863 790 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 12 168 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Aed1g1863 790 Gene3D HUPs 243 577 IPR014729 -
Aed1g1863 790 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 173 239 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Aed1g1863 790 TIGRFAM glnS: glutamine--tRNA ligase 267 787 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Aed1g1863 790 SUPERFAMILY Ribosomal protein L25-like 574 784 IPR011035 GO:0006412
Aed1g1863 790 Gene3D Ribosomal Protein L25; Chain P 699 783 IPR020056 -
Aed1g1863 790 MobiDBLite consensus disorder prediction 189 213 - -
Aed1g1863 790 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 273 284 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aed1g1863 790 PRINTS Glutamyl-tRNA synthetase signature 299 312 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aed1g1863 790 PRINTS Glutamyl-tRNA synthetase signature 270 282 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aed1g1863 790 PRINTS Glutamyl-tRNA synthetase signature 444 454 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aed1g1863 790 PANTHER GLUTAMINE-TRNA LIGASE 13 789 - -
Aed1g1863 790 Pfam tRNA synthetases class I (E and Q), catalytic domain 266 571 IPR020058 GO:0004812|GO:0005524|GO:0043039
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1863 Aed-Chr1 15984676 15992055 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1863 1 15984676 15992055 Aed1g1863 1 15984676 15992055 ECH