Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1857 ATGAGACTTTCCATTCTGCAAACCCACCCGCACCCGCACCCGCACCCGAACCCAATAAGGCGGTGGCCCCGGATGGACGCCGCGTCGTTCCACCGGCGAAAGGACAAGGTGGTTGTCATCATGGGCGCCACCGGCTCCGGCAAGTCGCGGCTCTCCATCGACCTTGCAACCCTCTTCCCCTCCTCCGAAATCATCAACTCAGACAAAATGCAAGTCTATCGCGGCCTCGACATCACCACCAACAAGATCCCCCAGGCGCAGCGCCGTGGCGTCCCCCACCACCTCATCGGCGACGTCGACCCCGACCTCGGTGAGTTCTCCCCCTCCGACTTCCGCCACCGCGCCTCCGACATCATCGCCGACATAACCCGCCGGAAAAACCTCCCCATCGTGGTCGGCGGTTCCAACTCCTTCGTCCACTCCCTCCTCGTTCATAACTTCGACCCTCATTCAAACGTCTTCCAACAGGGGCTTATATCCTCTGAGTTGCGGTACAGGTGTTGCTTCCTCTGGGTCGACATAGCCTTCCCCGTGTTGTCACAGTATTTGTGCGACCGAGTCGACGACATGCTTAACTCAGGGATGGTGGACGAGTTGGCCCAGTTCTTCAACACGGAGGACGCCGCGCGTGGAACGGGCTTGGGTATCAGAAAAGCCATTGGGGTTCCCGAGTTCGACCGGTTTTTCAATAAATACCAGTACCCTCCCTCTCACTCCGGCGATGATGATCCTCTGCGGGAGCGTGCGTACGAGGAGGCGGTGCGAGCGATTAAGGATAACACGTGTGAGCTGGCGGAGCGTCAGATAGAGAAGATCGAACGGTTGAAGCGCGCCGGATGGGACCTGCGGAGGATCGACGCCACGGAGGCGTTTCGGGTGGTGCTGACGTCAGGGTCCGGTGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 963 0.5919 MRLSILQTHPHPHPHPNPIRRWPRMDAASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPSSEIINSDKMQVYRGLDITTNKIPQAQRRGVPHHLIGDVDPDLGEFSPSDFRHRASDIIADITRRKNLPIVVGGSNSFVHSLLVHNFDPHSNVFQQGLISSELRYRCCFLWVDIAFPVLSQYLCDRVDDMLNSGMVDELAQFFNTEDAARGTGLGIRKAIGVPEFDRFFNKYQYPPSHSGDDDPLRERAYEEAVRAIKDNTCELAERQIEKIERLKRAGWDLRRIDATEAFRVVLTSGSGVWERQVLEPSVKIVKRFLME 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1857 320 Gene3D - 34 318 IPR027417 -
Aed1g1857 320 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 176 282 - -
Aed1g1857 320 Pfam IPP transferase 71 144 - -
Aed1g1857 320 Pfam IPP transferase 151 270 - -
Aed1g1857 320 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 319 IPR039657 -
Aed1g1857 320 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 29 319 - -
Aed1g1857 320 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g1857 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1857 Aed-Chr1 15942291 15943253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1857 164 318 C2H2 Transcription Factor Family AT2G27760 30.337 5.39e-14 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1857 1 15942291 15943253 Aed1g1857 1 15942291 15943253 ECH