Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1856 ATGGAGTCATCTTTGACAATCAGATTCCGATCACACACCCTTTTCTCTTCGACGGAGCACCCACTGCACAATCATCTTCTCATACCCATTTCACCAAAGTTGATCAGTTCAAGCACTACGCTTTCGGTGGTGGCGGCAGCGAAGAAAAAGCCAAGCTTCGAAGGTGTGAGCGAAGAGTTGAACGCAATGGCCTCTCAGAACCTTGACTTCGCACCCTCCCGGAGACGGGTCCGTGAAGCTTTCACCGAGGTGCACCAGAAGCTGGATCATTTATTGTTCAAGACTGCTCCTGCTGGGATCAGAACTGAGGAAGGGTATGAAAGGAATTCCAGGGGATTGGAAATTTTCTGCAAAAGCTGGATGCCGGAACCAGGCGTTCCACTCAAGGCTGCTTTGTGTTTCTGCCATGGTTATGGCAGCACTTGCACTTTCTTCTTTGAAGGATTACATGGTTACATACCAAATTTTGATGATTTGGTTGATGACGTTATAGAACATTATACAAAAATCATAGCAAGACCTGAGGTGAGGGGGTTGCCACGATTCATAATGGGCCAGTCAATGGGTGGAGCAATTGCTCTTAAGGTTCATTTGAAGGAACCAAACACTTGGGATGGAGTAATCCTTGTTGCACCAATGTGTAAATTTGAGAGCATTGAAGTGTTTTATTCTTCTAACGTCTTTGTCATCCTTAAGATTGCAGACGGCATGTTACCACCAACTGCAGTTTTGAAGGTATTAAATCTTTTGTCTAAAGTGATGCCAAAGGCAAAACTGTTTCCACACAAAGATATATCCGCGCTGACTTTCCGAGAACCTGGCAAGAGAAAAGTGGCTGGTTACAATGTTATTTCTTATGATCATCCAACACGTTTGAAAACTGGCATGGAGCTTTTAAGTGCTACTCAAGAAATTGAGTCACAGTTACATAAGGTTTCAGCTCCATTATTGATTCTTCATGGAGCAGCAGATCAGGTGACAGATCCATTAGTGAGCCAATTTCTTTATGAGAAAGCTTCTAGCAAGGATAAGACATTAAAGATCTATGAAGGAAGCTACCACGGCATTTTGGAAGGGGAACCTGATGACAGAATTTTCGCTGTCCACAATGACATTATCTCATGGCTTGATTATAGGTGCTCACTTACATGA 1152 0.4349 MESSLTIRFRSHTLFSSTEHPLHNHLLIPISPKLISSSTTLSVVAAAKKKPSFEGVSEELNAMASQNLDFAPSRRRVREAFTEVHQKLDHLLFKTAPAGIRTEEGYERNSRGLEIFCKSWMPEPGVPLKAALCFCHGYGSTCTFFFEGLHGYIPNFDDLVDDVIEHYTKIIARPEVRGLPRFIMGQSMGGAIALKVHLKEPNTWDGVILVAPMCKFESIEVFYSSNVFVILKIADGMLPPTAVLKVLNLLSKVMPKAKLFPHKDISALTFREPGKRKVAGYNVISYDHPTRLKTGMELLSATQEIESQLHKVSAPLLILHGAADQVTDPLVSQFLYEKASSKDKTLKIYEGSYHGILEGEPDDRIFAVHNDIISWLDYRCSLT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1856 383 PANTHER PHOSPHOLIPASE-RELATED 147 381 - -
Aed1g1856 383 PANTHER PHOSPHOLIPASE-RELATED 42 149 - -
Aed1g1856 383 SUPERFAMILY alpha/beta-Hydrolases 87 377 IPR029058 -
Aed1g1856 383 Pfam Serine aminopeptidase, S33 137 361 IPR022742 -
Aed1g1856 383 Gene3D alpha/beta hydrolase 98 380 IPR029058 -
Aed1g1856 383 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 147 381 - -
Aed1g1856 383 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 42 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1856 Aed-Chr1 15905934 15909319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1856 1 379 Acyl Lipid Metabolism Gene Families AT1G77420 51.733 6.78e-143 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1856 1 15905934 15909319 Aed1g1856 1 15905934 15909319 ECH