Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1846 ATGCCTCCTCCAATCTTGCCGGATTTCTCCAACTCGGTGAAGCTCAAGTACGTGAAACTTGGGTACCAATACCTGGTGAACCACATTCTGACCCTGACTCTGATACCCATCATGATTGGAATCTCGATCGAGGTTCTACGCTTAGGCCCAGAAGAGATCCTGAAGCTGTGGCAGTCCCTCCACCTGGACCTAGTCCAAATCCTTTGCTCCGCCTTCTTCATAATCTTCATAGCCACAGTATATTTCATGTCAAAGCCACGCACCATCTTCCTCGTCGACTACGCCTGCTTCAAGCCACCAGTCACGTGCCGTGTCCCCTTTGCAACCTTCATGGAACACTCCAGGCTCATCCTCAAAGACAACCCCAAGAGCGTCGAGTTCCAGATGAGGATTCTTGAACGCTCCGGCCTCGGTGAAGAGACCTGCCTCCCACCCTCCATTCACTACATCCCTCCCAAACCCACCATGGAGGCTGCCAGAGGTGAAGCCGAGCTTGTTATCTTCTCCGCCATGGACTCTTTGTTCACTAAAACCGGTCTCAAGCCTAAGGACATCGACATTCTCATTGTCAACTGCAGCCTCTTTTCCCCCACTCCTTCTTTGTCCGCCATGGTCATCAACAAGTACAAGCTCCGTAGCAACATCAAGAGCTTCAACCTCTCCGGCATGGGTTGCAGCGCTGGCCTTATATCCGTTGACTTGGCACGTGACCTTCTCCAAGTCCACCCTAACTCAAACGCCGTCGTTGTCAGCACCGAGATCATTACCCCTAACTACTACCAAGGCAAAGAGAGAGCCATGCTTCTTCCGAATTGCTTGTTCCGGATGGGGGGTGCTGCTATTCTGTTGTCAAACCGCAGCTCTGAGCGTAGCAGAGCCAAGTACAGATTGGTACACGTTGTTCGCACTCACAAGGGTGGTGATGACAAAGCTTACCGTTGCGTGTTTGAAGAGGAAGACAGAGAAGGGAAAGTGGGGATTTCGCTTCAGAAGGATCTGATGGCTATTGCAGGTGAGGCTCTCAAGTCTAACATCACCACCATGGGTCCTCTAGTCCTTCCGGCTTCGGAGCAGTTGCTGTTCCTTCTAACTCTCATTGGGAGGAAAATCTTCAACCCAAAATGGAAGCCTTATATTCCTGACTTCAAACAGGCCTTTGAGCACTTCTGCATCCATGCCGGTGGCCGTGCCGTGATTGATGAGCTGCAGAAGAATCTTCAGCTTTCTACTGAACATGTTGAGGCATCTAGAATGACCCTGCACAGGTTTGGGAACACTTCGTCTTCTTCGCTGTGGTATGAGCTCAACTACATTGAATCCAAGGGAAGGATGAAGAAAGGAGATAGGGTGTGGCAGATAGCCTTTGGGAGTGGGTTTAAATGCAACAGTGCTGTTTGGAAGTGCAACAGAAGCATTAAGACACCGGTTGATGGGCCTTGGGCTGATTGCATTGATCGTTACCCGGTCCATATTCCTGAGATCGTTAAGCTCTAG 1494 0.5054 MPPPILPDFSNSVKLKYVKLGYQYLVNHILTLTLIPIMIGISIEVLRLGPEEILKLWQSLHLDLVQILCSAFFIIFIATVYFMSKPRTIFLVDYACFKPPVTCRVPFATFMEHSRLILKDNPKSVEFQMRILERSGLGEETCLPPSIHYIPPKPTMEAARGEAELVIFSAMDSLFTKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSNAVVVSTEIITPNYYQGKERAMLLPNCLFRMGGAAILLSNRSSERSRAKYRLVHVVRTHKGGDDKAYRCVFEEEDREGKVGISLQKDLMAIAGEALKSNITTMGPLVLPASEQLLFLLTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSTEHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKKGDRVWQIAFGSGFKCNSAVWKCNRSIKTPVDGPWADCIDRYPVHIPEIVKL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1846 497 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 385 467 IPR013747 -
Aed1g1846 497 SUPERFAMILY Thiolase-like 274 468 IPR016039 GO:0016746
Aed1g1846 497 PIRSF Very_long_ch_3-ktacl-CoA_syn 8 497 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed1g1846 497 Pfam FAE1/Type III polyketide synthase-like protein 81 369 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed1g1846 497 CDD CHS_like 73 466 - -
Aed1g1846 497 PANTHER 3-KETOACYL-COA SYNTHASE 5 496 - -
Aed1g1846 497 PANTHER 3-KETOACYL-COA SYNTHASE 5 496 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed1g1846 497 Gene3D - 117 467 IPR016039 GO:0016746
Aed1g1846 497 SUPERFAMILY Thiolase-like 75 292 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1846 Aed-Chr1 15820357 15821850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1846 6 497 Miscellaneous Gene Families AT1G25450 82.114 0.0 880
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1846 1 15820357 15821850 Aed1g1846 1 15820357 15821850 ECH