Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1844 ATGTACTTATGTTATCCATCCAAAGAGCAGTTCACGGAACTTCCATACTCTAGAGTAGAGTCAGCTATGGTTTCTTCTCCTCGTTGCTTAGGTGCTGCTCTCTGTCTCTCTTACCTCCTTCTAAGTTATGTAGCTGCTGAAGAAGCCAGCTCTTCTAACAAAATTGGCCATGGCTACCGTCTAATATCCATTAAAGATGCCCCTGATGGTGCTCTTGTAGGCCTCCTTCAAGTTAAGCACAACAACAATATCTACGGCTCTGACATTCCCCTTTTACGCTTCTATGTCAAGCACGAGACTGAGAACCGTTTGAGGGTGCACATCACTGACGCAAAGAAACAAAGGTGGGAGGTCCCTTACACTCTTTTGCCAAGGGAGCAACCACCGCCTCTGAAGCAAAACACTGTGTGGTCGAGGAAGAACAACCTAGTACCAGACTTAGAGTACTCTGCCTCTGCCTCTGACCTTGTCTTCAGCTACACTTCAGACCCGTTTAGTTTTGCAGTGAAAAGGAAGTCAAATGGGGATACCCTTTTTGACTCAAATTCTAATGAGTTTAACTCATTGGTCTTCAAGGACCAGTACTTGGAAATTTCTACCAAATTGCCCAAAGATGCTTCTTTGTATGGTTTGGGAGAGAACACGCAGCCACACGGGATTAAGCTGTACCCAGGTGACCCTTACACTTTGTACACCACTGATGTATCAGCCATTAGCCTCAACACTGATTTATACGGGGCACACCCTGTGTACATGGATCTCAGAAATGAAGGTGGTGGCAAGCCTTATGCACATGGGGTTCTGTTGCTGAATAGCAATGGAATGGAAGTGTTCTACAGAGGAACGTCTCTGACTTACAAGATTATTGGAGGGGTGCTCGATTTTTACTTCTTTGCTGGACCCACGCCTCTCAATGTTGTGGATCAGTACACTTCCTTGATTGGCAGACCTGCTCCAATGCCATATTGGGCTTTCGGATTTCACCAATGCAGATGGGGCTATCACAACCTATCTGTAGTAGAAGATGTTGTGGAGAATTACAAGAAGGCTAAAATCCCACTCGATGTGATCTGGAATGATGATGATCACATGGATGGCCACAAGGACTTCACACTGAATCCAATTAACTACCCTCATTCCAAGCTTTTAGAATTCCTTGACAGAATACATAGCATTGGCATGAAATACATTGTAATCATTGATCCAGGAATTGCTGTTAACTCCAGTTATGGTGTATATCAAAGGGGTATGGCTGATGATGTTTTCATCAAGTATGAAGGTGAGCCCTTCTTGGCTCAAGTCTGGCCAGGAGCAGTTTATTTTCCTGATTTTCTCAATCCAAAAACAGTTTCTTGGTGGGTTGATGAGGTCCGTCGCTTCCATCAACTAGTCCCTGTTGATGGCTTATGGATTGACATGAATGAGGCTTCGAATTTCTGCTCTGGAAAGTGCACAATTCCTAAGGGTAAGGTGTGCCCAAATGGAACAGGACCTGGGTGGCTATGTTGCTTAGATTGCAAAAACATCACAAGCACACGCTGGGATGATCCTCCCTACAAGATTAACGCTTCAGGAGTAGAGGCTCCTATAGGATTCAAAACCATAGCCACTAGTGCAGTTCACTATAATGGTGTTTTGGAGTATGATGCTCACAGCATTTATGGCTTCTCTCAAGCAATTGCAACTCACAAGGCCCTTCAAGGGCTTCAGGGAAAAAGGCCTTTCATTTTGTCTCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAGGGCACATGGGAGGATTTAAGGTACTCAATATCCACAATGCTCAATTTTGGAATATTTGGGGTCCCAATGGTTGGTTCAGACATATGTGGTTTCTATCCAGCACCAACTGAAGAGCTTTGCAATAGGTGGATTGAAGTTGGTGCCTTTTACCCTTTCTCAAGGGACCATGCAAACTTCTACTCCCCTAGACAAGAACTTTACCAATGGGAATCAGTAGCTGAGTCTGCTAGAAATGCTTTAGGTATGAGGTATAAGCTCCTCCCATATCTTTACACCTTGAACTATGAGGCTCACGTTAGTGGAGCACCAATTGCAAGGCCTCTTTTCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCAGCACTCAGTTCTTACTAGGGAGCGGTCTAATGATCTCTCCTGTGCTTGACCAAGGGAAAACACAAGTCACAGCACTCTTCCCGCCTGGAACATGGTACAGTTTGTTTGATTTAACACAGATCATTGTGTCAAAAGATGGAAACTATGTCACCCTTGATGCACCTTTGCATGTGGTGAATGTGCATTTGTATCAGAATAGCATTCTTCCAATGCAACAGGGTGGAATGGTATCTAAGGATGCTAGAATGACACCCTTCAGCCTCGTTGTGACCTTCCCCGCTGGTGCAACTGAAGGAGAAGCCAAAGGGAACCTATTCCTTGATGATGATGAACTGCCAGAAATTAAGATTGGGAATGGCTACTCAACCTACATTGATTTCCATGCAAGTGTCAAAGAAGGAACAGTGAGAATTTGGTCACAAGTCCAAGAGGGCAAGTTTGCTTTAGATAAAGGTTGGGTTATTGACAACATAAATGTGTTGGGATTAAACGGAAATGGAGCACTACCTAAAATTGAGATTGATGGAGAACCACCGAGGAGTGTCTCAAATGTGCAAGTTAGCATAACTCAACATGAGTACTTTTTTGGGCAGGGAGATGGAGATAAGATACTGATGGTAGGGTTGAAGGGCTTGAATATCCCTCTAGGTACAAATTTTGCTGTCACCTGGAAGATGGGATCCTAA 2841 0.4417 MYLCYPSKEQFTELPYSRVESAMVSSPRCLGAALCLSYLLLSYVAAEEASSSNKIGHGYRLISIKDAPDGALVGLLQVKHNNNIYGSDIPLLRFYVKHETENRLRVHITDAKKQRWEVPYTLLPREQPPPLKQNTVWSRKNNLVPDLEYSASASDLVFSYTSDPFSFAVKRKSNGDTLFDSNSNEFNSLVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPGDPYTLYTTDVSAISLNTDLYGAHPVYMDLRNEGGGKPYAHGVLLLNSNGMEVFYRGTSLTYKIIGGVLDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPINYPHSKLLEFLDRIHSIGMKYIVIIDPGIAVNSSYGVYQRGMADDVFIKYEGEPFLAQVWPGAVYFPDFLNPKTVSWWVDEVRRFHQLVPVDGLWIDMNEASNFCSGKCTIPKGKVCPNGTGPGWLCCLDCKNITSTRWDDPPYKINASGVEAPIGFKTIATSAVHYNGVLEYDAHSIYGFSQAIATHKALQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANFYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLGSGLMISPVLDQGKTQVTALFPPGTWYSLFDLTQIIVSKDGNYVTLDAPLHVVNVHLYQNSILPMQQGGMVSKDARMTPFSLVVTFPAGATEGEAKGNLFLDDDELPEIKIGNGYSTYIDFHASVKEGTVRIWSQVQEGKFALDKGWVIDNINVLGLNGNGALPKIEIDGEPPRSVSNVQVSITQHEYFFGQGDGDKILMVGLKGLNIPLGTNFAVTWKMGS 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1844 946 Gene3D glycosyl hydrolase (family 31) 52 316 - -
Aed1g1844 946 Gene3D - 683 782 IPR013780 -
Aed1g1844 946 SUPERFAMILY Glycosyl hydrolase domain 700 780 - -
Aed1g1844 946 CDD GH31_N 196 315 - -
Aed1g1844 946 SUPERFAMILY Galactose mutarotase-like 55 303 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed1g1844 946 Pfam Galactose mutarotase-like 206 276 IPR025887 -
Aed1g1844 946 ProSitePatterns Glycosyl hydrolases family 31 active site. 468 475 IPR030458 -
Aed1g1844 946 Pfam Glycosyl hydrolases family 31 296 787 IPR000322 GO:0004553|GO:0005975
Aed1g1844 946 CDD GH31_MGAM_SI_GAA 315 695 - -
Aed1g1844 946 PANTHER ALPHA-GLUCOSIDASE 32 945 - -
Aed1g1844 946 SUPERFAMILY (Trans)glycosidases 306 698 IPR017853 -
Aed1g1844 946 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 75 204 IPR031727 -
Aed1g1844 946 Gene3D - 785 946 IPR013780 -
Aed1g1844 946 Gene3D Glycosidases 317 682 - -
Aed1g1844 946 PANTHER ALPHA-GLUCOSIDASE 32 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1844 Aed-Chr1 15786674 15790570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1844 49 945 Glycoside Hydrolase AT1G68560 74.194 0.0 1420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1844 1 15786674 15790570 Aed1g1844 1 15786674 15790570 ECH