Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1833 ATGGCTGAGGAACCGCTATATCCAATAGCAGTGCTTATAGATGAGTTGAAAAACGATGACATCCAGCTGCGGTTGAACTCAATTCGCAGGCTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACCCGTCGAGAATTAATTCCATTTTTGAGTGAAAATAATGATGATGATGATGAAGTACTTCTTGCAATGGCAGAAGAGTTGGGAGTGTTCATTCCTTATGTTGGGGGAGTGGAACATGCCAGTGTGTTGCTGCCACCGCTGGAGACACTTTGCACAGTTGAGGAAACCTGTGTGAGAGATAAAGCTGTGGAATCACTTTGTAGAATTGGATCTCAAATGAGGGAGAATGATTTGGTTGAATGTTTCATCCCATTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACTGCTCGAGTGTCTGCATGTGGACTATTTCATATTGCATACCCTAGCGCCCCAGAAACATCAAAGACAGAGTTGAGATCAATATACAGTCAGTTATGTCAGGATGACATGCCCATGGTTAGAAGGTCAGCTGCATCAAATCTTGGGAAATTTGCTGCCACTGTTGAATATGCTCATTTGAAGGCTGATGTCATGTCAATTTTTGAGGACCTTACTCAAGATGATCAAGATTCTGTCAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTGCACATATACTCCCAGTTATTGTTAACTTCTCCCAGGAATTGTCATCAGATTCTTCTCAGCATGTCCGGTCTGCTTTGGCTTCAGTAATAATGGGAATGGCTCCAGTGTTGGGAAAGGAAGCAACAATTGAACAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGATGAATTTCCCGATGTGCGCCTAAACATTATCAGCAAGCTTGATCAAGTTAATCAGGTTATAGGAATCGATCTGTTATCTCAGTCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAGAATATATACCCTTATTGGCAAGTCAATTGGGGGTTGGGTTTTTTGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGATAAGGTTCATTCAATTCGTGAAGCAGCTGCTAACAACTTGAAACGCCTTGCTGAAGAATTTGGACCTGAGTGGGCTATGCAGCACATAATTCCTCAGGTTTTGGAGATGAACAACAATCAACACTATCTGTATCGGATGACTATTCTTCGTGCTATCTCTCTGCTTGCTCCTGTGATGGGCCCTGAAATCACTTGTTCAAACTTGTTACCGGTTGTTGTTGCTGCATCAAAAGACAGAGTGCCCAACATAAAGTTCAATGTGGCAAAGGTATTAGAGTCCATCTTCCCCATCGTTGATCAGTCTGTGGTGGAGAAGACTATCCGTCCATGTCTGGTTGAGCTCAGTGAGGATCCTGATGTTGATGTGCGATTTTTCTCCAACCAAGCACTGCAGGCAATTGATAATGTCATGATGTCTAGCTAG 1536 0.4388 MAEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRRELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHASVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRENDLVECFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYAHLKADVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMNNNQHYLYRMTILRAISLLAPVMGPEITCSNLLPVVVAASKDRVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELSEDPDVDVRFFSNQALQAIDNVMMSS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1833 511 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A, PUTATIVE-RELATED 3 251 - -
Aed1g1833 511 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A, PUTATIVE-RELATED 250 511 - -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 240 282 IPR021133 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 361 399 IPR021133 -
Aed1g1833 511 Gene3D - 2 249 IPR011989 -
Aed1g1833 511 Gene3D - 250 507 IPR011989 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 283 321 IPR021133 -
Aed1g1833 511 Pfam HEAT repeats 285 385 - -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 439 477 IPR021133 -
Aed1g1833 511 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 3 251 - -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 8 46 IPR021133 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 322 360 IPR021133 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 400 438 IPR021133 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 201 239 IPR021133 -
Aed1g1833 511 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 250 511 - -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 162 200 IPR021133 -
Aed1g1833 511 ProSiteProfiles HEAT repeat profile. 478 511 IPR021133 -
Aed1g1833 511 SUPERFAMILY ARM repeat 5 504 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1833 Aed-Chr1 15712096 15717345 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1833 1 15712096 15717345 Aed1g1833 1 15712096 15717345 ECH