Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1829 ATGATGGATTCCGCTTCTTTCTCTTCCTCCTCCTCCTCTTCCGAGTTTGCATCCATAGCTCCCGTTGATCAGAGTGCTGCTCGGAGCACCGTAGAAGGCGCGGCGGCGGCGGAGCAATCGCGGCGGTGGCACGATGTGTTCTGGTTAGGAATATTCCTAATCCATTTGATTGGGCTTGGGTTGCTTCTGGGGGTTCTTGGTCTGAATAGGTTCGAGAGAGAGAATAGGCTTAACATTGACAAGTACACGTCTCGGTTTTCTGAGAACGAATCCGGGTTGACCGAGACTTACTGGCCACTGTATGCTGCTGCTGGAGGTGTTGGAACTGTTCTTGGATGGAGTTGGTTGCTGTTGTTGGGTTCACAGGCTACCCAAATGATGAAGGTCTCTGTTCACATACTCACCACTTACCTTGCTGTCATCAGTGTTTTGTGTTTCTGGGCTGCCCAGATTTTCTGGGGGGTTGCTTTTGCTATTGGAGCTTCTATTCAGTTCCTCTATGTCATATCAGTCATAGACAGACTTCCATTTACAATGTTGGTTCTGCGAAAAGCTGTGAAGATGGTTTGGAATATTCCTGAGGTTATGAGAGTGGCATATGCGTTTATGTTTGCCGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCCGCGGGTGTTGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTTTTGTGGTTCTCTCTGTGAGCTTATTTTGGACAGGTGCAGTACTATGTAATACTGTGCATGTTGTAGTGTCTGGGATGGTGTTTCTTGTTCTTTTTCATGGTGGTAGAGATGCAGCTTCTATTCCAGCTAACTCCTTAATGAAGTCTCTACAGTATGCTTTAACAACATCTTTTGGCAGCATTTGTTATGGTTCATTATTTACTGCAGCTATTAGGACACTACGGTGGGAGATACGGGGATTTCGGTCAAAGATTGGCAATAATGAGTGTTTACTTTGCATGGTTGATTTCCTTTTCCATCTTGTGGAGACTCTTGTTCGTTTTTTTAATAAGTATGCATATGTTCAGATTGCTGTTTATGGTAAAAGCTTTAACCGTTCAGCTAGAGATGCATGGGAGTTATTTCAGTCAACTGGGGTTGAGGCACTTGTGGCCTATGATTGTTCTGGTGCTGTTCTTCTAATGGGAACTGTTTTTGGTGGGCTGATAACTGGAACTTGCTCTGGTGTTTGGGCATGGGTTCAATGGAGAGACAGAGTTATTATGATTGGATCCACAACCATGCTGATGGGGATGGTACTGGTTGGATTGGCAATGGTTGTGGTGGAAAGTGCTGTTACATCTATATACATATGCTATGCAGAAGACCCCTTATTGATTCAGAGATGGGATGCTGAATTTTTCAACCAGATGTCTGAGACACTTCATCAGAGACTTCAATATAGGAGTGCTCGAGCAAGGGAAGTTTTAACCCGTAATCGACTCGATGACATTGATCGACAAAACGCTTCTATTTGA 1497 0.4496 MMDSASFSSSSSSSEFASIAPVDQSAARSTVEGAAAAEQSRRWHDVFWLGIFLIHLIGLGLLLGVLGLNRFERENRLNIDKYTSRFSENESGLTETYWPLYAAAGGVGTVLGWSWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWAAQIFWGVAFAIGASIQFLYVISVIDRLPFTMLVLRKAVKMVWNIPEVMRVAYAFMFAVLLWMALWSFGAAGVVASSMGDGGRWWLFVVLSVSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDAASIPANSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCMVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWVQWRDRVIMIGSTTMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHQRLQYRSARAREVLTRNRLDDIDRQNASI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1829 498 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 24 490 - -
Aed1g1829 498 Pfam Plasma-membrane choline transporter 156 450 IPR007603 GO:0022857|GO:0055085
Aed1g1829 498 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 24 490 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1829 Aed-Chr1 15695997 15700144 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1829 1 15695997 15700144 Aed1g1829 1 15695997 15700144 ECH