Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1560 ATGGATAAAGTAGGGCGAAGTTTTAGAACATTGTTTGTTGTGGGTTCCATAACCTTCCCTATTTTACTCACATTTACTCTCATACACCAAAACTCTTTTTTTGATCTCGTCCAAGTATTGCCGTCTGGAACAACACAGAATACTACTACAGTTCAAGCTCCGGATCACAACATTATTAGAGAGTCAGTTGTAGGTCCCAAGAATCATTCATTTGAAGATGGAAATAATTCTCTATCCCTATCTGCTACTACCTTTGCTAAAGACAAACTCCTTGGTGGACTTCTAGTTTCCTCACTTGATGAAGCATCATGCTTAAGTAGATATCAATCTTACTTGTACCGCAGAGCTTCCCCTCATAAACCTTCTGAATATCTGATATCCAAGCTACGAAACTATGAACATCTTCATCGGACTTGTGGACCTTCTACCAAATCCTACAACAAAATCATGAGAAAGGGAAAAAATGATGCTAGTACAAGTACAGAATGCAAATATCTTGTCTGGACAGCTTCCAATGGCTTAGGGAACAGGATACTAACCTTGGTTGCAGCATTTCTTTATGCTATCCTTACAGACCGTGTTCTACTTGTCAAATTTGGGGCTGATATGTCCGGCCTCTTTTGTGAGCCGTTTCCTGATTCCTCATGGTTATTGCCCAGGAGTTTTCCTTATTGGAAAGATCAGAAACATATTGAAACATATGAAAGCATGTTAAAGCATAACAAGGCAAACATTTCACATGAGCTTTTGCCAGCATTTCTTATTCTTAATCTACAGCACACCCATGATGGTCACAATAATTTTTTTCATTGTGATCGTAGTCAAGATCTTCTCCAGAAAATTCCTGTGCTGATTTTATGGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTTCCTCATTTAGACAAGATCTAAGTAAAATGTTCCCTGAGAAAGACACTGTTTTTCACCACCTGGGACGTTATCTTCTTCACCCATCAAATGAGGCATGGGAAATAATTAGAAAATTCTATGAGGCACACCTAGCCAAGGCAAACGAGAGGATAGGCCTTCAGATTAGAGTATTTAATACTCATCGAGCACCACATCAAACCATTATGAATGAAATTATATCCTGCACCCTTCAGCATAAGTTGCTGCCTGATTTCGACATGCAAAAGTCACCAACTTCTCCTATGAAGAAGACCTCAAAAGCTGTTCTCGTAGCATCTTTATTCTCAGAATATGGTGAGAAGCTGAGGGCTATGTATCAGGCAAATACAACTGTGACCAGGGAAGTAATACAAGTTTATCAGCCAAGTCATGAAGAGCGTCAAAAGTCAAACAATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGCATATGGGGAAACCATCCCAGATCCACCTTGTCGTCGAGCAAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGATTGTAGGGCCAATAGCACAGTTGATTTTACTTCTCTCTTTCATTATATGAAACATTGTGAAGATGTATCTAGTGGATTGAGGCTGGTTAATGCTAATCACTAG 1653 0.3956 MDKVGRSFRTLFVVGSITFPILLTFTLIHQNSFFDLVQVLPSGTTQNTTTVQAPDHNIIRESVVGPKNHSFEDGNNSLSLSATTFAKDKLLGGLLVSSLDEASCLSRYQSYLYRRASPHKPSEYLISKLRNYEHLHRTCGPSTKSYNKIMRKGKNDASTSTECKYLVWTASNGLGNRILTLVAAFLYAILTDRVLLVKFGADMSGLFCEPFPDSSWLLPRSFPYWKDQKHIETYESMLKHNKANISHELLPAFLILNLQHTHDGHNNFFHCDRSQDLLQKIPVLILWSDQYFVPSLFMISSFRQDLSKMFPEKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLAKANERIGLQIRVFNTHRAPHQTIMNEIISCTLQHKLLPDFDMQKSPTSPMKKTSKAVLVASLFSEYGEKLRAMYQANTTVTREVIQVYQPSHEERQKSNNDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILQRAYGETIPDPPCRRAKSMEPCFHYPPKYDCRANSTVDFTSLFHYMKHCEDVSSGLRLVNANH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1560 550 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 549 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aed1g1560 550 Gene3D - 332 486 - -
Aed1g1560 550 Pfam Xyloglucan fucosyltransferase 86 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aed1g1560 550 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 6 549 - -
Aed1g1560 550 Gene3D - 160 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1560 Aed-Chr1 13846158 13852006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1560 81 546 Xyloglucan Fucosyltransferase1 AT2G03220 51.688 3.81e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1560 K13681 - gmx:100799776 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1560 1 13846158 13852006 Aed2g0061 2 468925 476065 PCT