Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1559 ATGAGAAATGATGCAGATAGTACAGGTACAGAAAAATGCAAATATCTTGTCTGGACAAGTGCCAATGGCTTAGGGAACAGGATGATAACCTTGGTTTCAGCATTTCTTTATGCTATCCTCACAGATCGTGTTCTGCTTGTCAGATTTGGGTCTGATATGTTTAGTCTTTTTTGTGAGCCATTTCCTCATTCCTCATGGTTGTTGCCTAATAACTCTCCTTGTTGGAAAGATCTTAAACATTTTCAAACGCCTGAAACCATACTCTTAAAGGCAAACAATTCAAAGGAGCTGCTTTTCCCGCCATTTCTTATTCTTAATCTAACGCACAACCATATTGATCATACCAATCTTTTTCATTGTGATCCAACTCAAGATCTTCTCCAGAAAACTCCTGTGCTGATTTTATGGTCTAATCAATATTTTGTCCCTTCTCTTTTTATGATTTCCTCATTTAGACAAGACCTCAGCAAAATGTTCCCTGATAAAGACACTGTTTTTCACCACCTGGGACGTTACCTTCTTCACCCCTCAAATGAGTCATGGGAACTAATTCGAAATTCCTATGAGGCACACCTAGCCAAGGCAGATGAGAGGATTGGCCTTCAGATTAGAGTATTAAGTACTCATCAACCACCACACCAAACCATTATCAATGAGGTTATAGCCTGCACCCTTCTGAATAAGTTGTTGCGAGCTGATCAATTCGACATGCAAAACTCAGTAATTGAAGAAGAAGAAGCAGACATCAAAGAATATGGTGAGAAGTTGAGGAGTAAGTATGAGGGAAGGGATGATGTAGTAGTAAGAGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGTCAAATGATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGTTAAGTTTATGTGATGCATTGGTCACAAGCCCCAGGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCTATGGATTTTGGAGGGGGTGTATGGAAAAACCATCCCAGATCCACCTTGTCGACGAGCCATGTACATGGAGCCTTGTTTCCAATATCCTCCTAAGACAGACAAATAA 1074 0.3985 MRNDADSTGTEKCKYLVWTSANGLGNRMITLVSAFLYAILTDRVLLVRFGSDMFSLFCEPFPHSSWLLPNNSPCWKDLKHFQTPETILLKANNSKELLFPPFLILNLTHNHIDHTNLFHCDPTQDLLQKTPVLILWSNQYFVPSLFMISSFRQDLSKMFPDKDTVFHHLGRYLLHPSNESWELIRNSYEAHLAKADERIGLQIRVLSTHQPPHQTIINEVIACTLLNKLLRADQFDMQNSVIEEEEADIKEYGEKLRSKYEGRDDVVVRVYQPSHEEHQKSNDDMHNIKAWTEIYLLSLCDALVTSPRSTFGYVAHSLGGLKLWILEGVYGKTIPDPPCRRAMYMEPCFQYPPKTDK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1559 357 Gene3D - 10 64 - -
Aed1g1559 357 Pfam Xyloglucan fucosyltransferase 5 356 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aed1g1559 357 Gene3D - 247 323 - -
Aed1g1559 357 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 9 356 - -
Aed1g1559 357 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 356 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1559 Aed-Chr1 13842578 13843679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1559 10 356 Xyloglucan Fucosyltransferase1 AT2G03210 45.628 2.35e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1559 K13681 - gmx:100814715 561.222