Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0549 ATGGAAAAACGCAGACAAACAATGTTGTTCCAAAAAGAAAGAAAAAGGAGGGCCCTTGAGATGCCTGCATCATCAAGTCTAAGCAAACAAAGCAACAACATAAAGTGTCTGACTCTGGATCCTCAAGGGAATCATCTTCTTCTTCATCATCACCACCACACAACGGAAGAGGAGCAGCAGCAGCAACGGAAACGGACTTTGTCGGGTGCGGTGGAGCATGCTGGAACGACGTCGTCGTCGAGGCAGGGGATGGTGAGAGGAGGAGTAGGTGAGATAGTGGAAGTTGAAGGCGGTCACATTGTGCGGTCCACAGGGCGGAAGGACCGTCACAGCAAAGTATGCACCGCAAAAGGCCCGCGTGACCGACGGGTCAGACTATCGGCCCACACCGCCATTCAATTCTACGACGTCCAGGACCGGCTCGGCTACGACCGCCCAAGTAAAGCCGTCGACTGGCTCATCAACAAAGCCAAGTCCGCCATCGACCAGCTCGCCCACCTGCCACCCTGGGAACCCACTCTCCCCGCACCTCCAAACGACGACGATGAGTCAGACAAACCAAACCCTAGCTCCAACCCGAACCAAAATCCAAACCCCGATGCTGAAATTCTCAACCAGTTCAACGACAACGATACCAACAACAACGAGAACCTCCACCATCATCACGATGGCGGAGGTTCGAGTTATCTTCCCATGGATAACGACGCCATAAGGTCGTTCTTCCCCACAACGACGTCGTCCTTGGTTCACTTCCAGAGCTACCCGCCGGATTTGCTCTCCAGAACAAGCAGCCAGGACCTGCGTCTCTCGCTTCAGGCGAGGAGGAGCACGACGGCGGCATGTCCGATAAGCCGTCCTCTGCTTCCTCCGATTCTCATTCTCGCCGTTGAACCGCCCGCTCGCCATCCTCGCCGATTTTGGTCTCCTTGGAATCAATTGGGTATGTGTGTGATCTGTTTTTGCAGGGATGGAGGAGGTATGGAGTTGGATTTGGAATGGTTCGGTCGGTTTAGTGGGACTATGCTTGTGGAATGA 1035 0.5411 MEKRRQTMLFQKERKRRALEMPASSSLSKQSNNIKCLTLDPQGNHLLLHHHHHTTEEEQQQQRKRTLSGAVEHAGTTSSSRQGMVRGGVGEIVEVEGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDQLAHLPPWEPTLPAPPNDDDESDKPNPSSNPNQNPNPDAEILNQFNDNDTNNNENLHHHHDGGGSSYLPMDNDAIRSFFPTTTSSLVHFQSYPPDLLSRTSSQDLRLSLQARRSTTAACPISRPLLPPILILAVEPPARHPRRFWSPWNQLGMCVICFCRDGGGMELDLEWFGRFSGTMLVE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0549 344 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 72 273 IPR005333 GO:0003700
Aed1g0549 344 MobiDBLite consensus disorder prediction 52 83 - -
Aed1g0549 344 MobiDBLite consensus disorder prediction 1 20 - -
Aed1g0549 344 ProSiteProfiles TCP domain profile. 106 164 IPR017887 -
Aed1g0549 344 PANTHER TRANSCRIPTION FACTOR TCP4 72 273 - -
Aed1g0549 344 MobiDBLite consensus disorder prediction 188 213 - -
Aed1g0549 344 Pfam TCP family transcription factor 105 210 IPR017887 -
Aed1g0549 344 MobiDBLite consensus disorder prediction 1 27 - -
Aed1g0549 344 MobiDBLite consensus disorder prediction 165 229 - -
Aed1g0549 344 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0549 Aed-Chr1 7031966 7034251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0549 87 315 TCP Transcription Factor Family AT3G15030 48.462 4.33e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed1g0549 TCP 3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0549 1 7031966 7034251 Aed5g1237 5 11238065 11239736 ECH
Aed1g0774 1 8698547 8699569 Aed1g0549 1 7031966 7034251 ECH
Aed1g0549 1 7031966 7034251 Aed1g0549 1 7031966 7034251 ECH