Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0542 ATGCCTTCATCTTCTTTCCCAAAGTACTTCTACCCTCGCCCTCCACCTCGCAGAGCCTCATTCCTCGTCTTCTCATGCCTCTTCCTCACCCTCTCTGTTTTCTTCCTCTGTTTTCTCAGACCCTTTCGGGACCCTCCCTGCCCCACCAACCGCAGCCCCAGATCGGTTAAAGTTCTCTGGGATCACCGCCCCTCCTCCAATGAAAATAACAACGCTCGAGTTGAGAATAGACACAAGGTTATGGCCTTTGTGGGAATTCAAACCGGGTTTGGATCCGTTGGGAGGCGCCAATCTCTCAGGAACACTTGGTTTCCTTCCGATCCACATGGACTTCAAGGCTTGGAAGAAGCCACTGGATTGGCCTTTAGGTTTGTGATTGGTAGAACGAACGATAGATCAAAGATGTCTGCACTTCAGAATGAAGTGGCACAATATGATGATTTCATTTTACTGGATATTGAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTGGCTTTCTTCAAAGCTGCTTACGCACTTTTTGAAGCTGAGTTTTATGTCAAAGCAGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTACTTCTGGCAAAAGAGCGATCTCACCCTCAGACTTACATAGGATGCATGAAAAAGGGTCCTGTTTTCACTGATCCCAAACTCAAATGGTATGAGCCACTATCTAGTTTGCTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATACGCTCTCTCTGCTGATGTTGTATCCAGCTTGGTAGCACTTAAGAATAACAGGCAAGTCTTTGTAATCCAGAAAAGAGAATGTTGGAACTCCATCAAACAGAAAGTTGTACACGGAGTTCAACTGTGGACTCTGATGAATAGTATTTCTCTGCATATTTATGAAGTGAAGGTGAATTGCCTGCTCTTGTTATGTTTTACTGCTGTGAGCAGCTACCATTGCAATCCTTTTCTGTCCATTGATCTTTCTCCTTCTGATTCATATTTTCTTCATGTCTGA 1014 0.4369 MPSSSFPKYFYPRPPPRRASFLVFSCLFLTLSVFFLCFLRPFRDPPCPTNRSPRSVKVLWDHRPSSNENNNARVENRHKVMAFVGIQTGFGSVGRRQSLRNTWFPSDPHGLQGLEEATGLAFRFVIGRTNDRSKMSALQNEVAQYDDFILLDIEEEYSKLPYKTLAFFKAAYALFEAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSSLLGKEYFLHAYGPIYALSADVVSSLVALKNNRQVFVIQKRECWNSIKQKVVHGVQLWTLMNSISLHIYEVKVNCLLLLCFTAVSSYHCNPFLSIDLSPSDSYFLHV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0542 337 Pfam Galactosyltransferase 95 267 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed1g0542 337 Gene3D - 73 309 - -
Aed1g0542 337 PANTHER HEXOSYLTRANSFERASE 6 262 - -
Aed1g0542 337 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 6 262 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0542 Aed-Chr1 6982031 6986179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0542 4 262 Glycosyltransferase AT3G14960 67.910 2.97e-123 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0542 1 6982031 6986179 Aed1g0542 1 6982031 6986179 ECH
Aed1g0542 1 6982031 6986179 Aed5g1261 5 11630020 11636667 PCT