Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0390 ATGGCAAGTGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCATTTGGGATGAGGGTTAAGATTGCACTTGCTGAAAAGGGTATCAAGTATGAGTACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTGCTCCTTCAAATGAACCCTGTTCACAAGAAAATCCCGGTTCTCATCCACAATGGCAAGCCAATTTGTGAGTCCCTCATTGCTGTTCAGTACATTGATGAGGTTTGGAATGACACAAGTCCCTTGTTCCCTTCTGACCCTTACCAGAGAGCTCAGGCTAGATTCTGGGCTGATTATGTCGATAAGAAGATATATGATCTCGGAAGGAAGATTTGGACAACAAAAGGAGAAGAAAAAGAAACTGCCAAGAAGGATTTCATAGAGGCCCTCGAATTGTTGGAGGAACAATTGGGAGACAAGACTTACTTTGGAGGAGACAATCTTGGTTTTGTGGATATATCACTTGTTCCATTCTACACTTGGTTCAAAGCCTATGAGACTTTTGGCACCTTCAACATAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCCTGCAGAAAGAGAGTGTTGCCAAGTCTCTTCCTGATCAGGATAAGGTCTATGACTTCATGATGGACTTAAGAAAGAAGTTAGGCTTTGAGTAG 660 0.4364 MASEVVLLDFWPSPFGMRVKIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDTSPLFPSDPYQRAQARFWADYVDKKIYDLGRKIWTTKGEEKETAKKDFIEALELLEEQLGDKTYFGGDNLGFVDISLVPFYTWFKAYETFGTFNIESECPKFIAWAKRCLQKESVAKSLPDQDKVYDFMMDLRKKLGFE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0390 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Aed1g0390 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Aed1g0390 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Aed1g0390 219 Gene3D - 88 219 - -
Aed1g0390 219 CDD GST_N_Tau 5 78 - -
Aed1g0390 219 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Aed1g0390 219 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Aed1g0390 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Aed1g0390 219 Pfam Glutathione S-transferase, C-terminal domain 121 188 - -
Aed1g0390 219 Gene3D Glutaredoxin 1 87 - -
Aed1g0390 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Aed1g0390 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Aed1g0390 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Aed1g0390 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0390 Aed-Chr1 5604286 5605980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0390 1 216 Glutathione S-transferase Gene Family AT1G78380 70.833 8.43e-119 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0390 1 5604286 5605980 Aed1g0390 1 5604286 5605980 ECH