Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0386 ATGTCGAACGAGGTGGTTGTTCTGTTGGATGCATGGGGCAGCATGTTTGGGATGAGGGCATCGATTGCATTGGAAGAAAAGGGTGTGAAGTATGAACACAAGATAGAGGACCTCAACAACAAGAGCTCTTTGCTTCTGCAGATGAACCCTGTTTACAAGCAAATTCCAGTTCTGATCTATAATGGCAAACCCATTTCTGAATCTGCAATTATAGTGCAGTTCATTGATGAGGTTTGGAATCACAAAGCTCCAATCTTGCCCTCTGATCCTTATGAGAGAGCTCAAGCCAGGTTCTGGGTTGATTACATTGACAAAAAGGTGTATCCTTCTTTTAATAAAATGTGGCTTTCTAAAGGAGAAGAAGAGCATGAGGCAGGGAAAAAGGAGTTGATCTCTGTGTTTAAGCAGCTAGAAGAGACATTGGGTGACAAACCTTTCTATGGAGGTGATACCTTTGGGTTTGTTGATATTGCTCTAATCACTTTCTACTGTTGGTTTTATACTTTTGAGAAATATGGCAACTTTGAAATGGAGGCAGAGTGTCCTAAAATTGTGGCTTGGGCTAAGAGATGCAATGAGAGAGAGACTGTGTCCAAAGTTCTTCCTGATGAAAAGGAATTGTATGATGCAGTTGTGGAAATGAAGAAGGAACGTGATTCGAAATAG 666 0.4114 MSNEVVVLLDAWGSMFGMRASIALEEKGVKYEHKIEDLNNKSSLLLQMNPVYKQIPVLIYNGKPISESAIIVQFIDEVWNHKAPILPSDPYERAQARFWVDYIDKKVYPSFNKMWLSKGEEEHEAGKKELISVFKQLEETLGDKPFYGGDTFGFVDIALITFYCWFYTFEKYGNFEMEAECPKIVAWAKRCNERETVSKVLPDEKELYDAVVEMKKERDSK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0386 221 Gene3D Glutaredoxin 1 88 - -
Aed1g0386 221 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Aed1g0386 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Aed1g0386 221 CDD GST_N_Tau 6 79 - -
Aed1g0386 221 Gene3D - 89 220 - -
Aed1g0386 221 SFLD Main (cytGST) 2 218 - -
Aed1g0386 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 -
Aed1g0386 221 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Aed1g0386 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 218 IPR010987 -
Aed1g0386 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 215 - -
Aed1g0386 221 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Aed1g0386 221 CDD GST_C_Tau 90 214 IPR045074 GO:0004364|GO:0006749
Aed1g0386 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Aed1g0386 221 Pfam Glutathione S-transferase, C-terminal domain 106 195 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0386 Aed-Chr1 5593002 5593976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0386 1 217 Glutathione S-transferase Gene Family AT1G78380 61.751 1.82e-99 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0386 1 5593002 5593976 Aed1g0386 1 5593002 5593976 ECH