Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0341 ATGATGGAGCGAAGACAGAATCGAACTCCACAAGGCCAAATAGCTAGGGTTTTGGTTGAATTTCTGGAGGTGGCTGTTACTGCTGTGGTTTTTCTCAAAGGGATTTATCCTTCTGGGCTTCTACCCTTCATACAAAAGGGAATGGTGGAGAGAGTAGCTGTTATTTTCTTCAATGCTGACAAAGTTCCATTGGAGAAATTTGTATTCAAGCTAGCAATGAACCAATCTTATAGTTCAGAGGTGGAAGAGGCTCTTGGAGAAAGGGTTAAGCCCGTTTTGGTGGTGAACAAGATGGATAGGTGCTTCCTTGAGCTCCACCTTGATGCAGAGGATGCATACCTTACATTTCAAAGGGTTGTGAATGTGATCATGGCAACTTATGAAGATGCAGCACTTGGTGATATTCAGGTATACCCTGAAAAAGGCACAGTTGCTTTCTCTGCTGGCTTGCATGGATGGAGTTTTACACTCACCAACTTTGCAAAAATGTATGCTTCCAAGTTTGGAGTTGATGAGGCAAAGATGATGAGTAGGCTTTGGGGTGAGAATTTCTTTGACTCTGCTACCAAAAAGTGGACCAACAAGCACACCAGGACTTCTACTTGCAAGTGCGGCTTTGTTACGTTCTGTTATGAACCAATCAAACAAATTATTGAACTTTGCATGCGGGACCAAAGGGATGTGCTGTGGCCGAGGTTGGAAAAGCTTGGGGTGAACTTGAAGTCAGAGGAAAAGGAGTTGACAGGAAAGGCTTTGATGAAGCATGTTATGCAGAGCTGGCTTCCGGCAAGTAGAGCGCTTCTGGAAATGATGATATATCACCTTCCCTCTCCATCCATTGTACGAGGGTCCCCTTGA 858 0.4441 MMERRQNRTPQGQIARVLVEFLEVAVTAVVFLKGIYPSGLLPFIQKGMVERVAVIFFNADKVPLEKFVFKLAMNQSYSSEVEEALGERVKPVLVVNKMDRCFLELHLDAEDAYLTFQRVVNVIMATYEDAALGDIQVYPEKGTVAFSAGLHGWSFTLTNFAKMYASKFGVDEAKMMSRLWGENFFDSATKKWTNKHTRTSTCKCGFVTFCYEPIKQIIELCMRDQRDVLWPRLEKLGVNLKSEEKELTGKALMKHVMQSWLPASRALLEMMIYHLPSPSIVRGSP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0341 285 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 82 279 - -
Aed1g0341 285 Pfam Elongation factor Tu GTP binding domain 81 277 IPR000795 GO:0003924|GO:0005525
Aed1g0341 285 Gene3D Yeast translation eEF2 (G' domain) 157 261 - -
Aed1g0341 285 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 82 279 - -
Aed1g0341 285 SUPERFAMILY The spindle assembly checkpoint protein mad2 9 79 IPR036570 -
Aed1g0341 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0341 Aed-Chr1 5188553 5192589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0341 81 278 Eukaryotic Initiation Factors Gene Family AT1G56070 75.124 3.12e-107 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0341 1 5188553 5192589 Aed1g0341 1 5188553 5192589 ECH