Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0325 ATGGCTCCAACTTTCAGCTCCTCAAATTCCTTGTATGACTTTGTTGTCAGAGATGGCAATGGAGTGAAAGGTTTGGTAGACTCAAGTGTACCAGAGGTGCCAGAGAGGTACAAGCAACCTCCACAGGAAAGAATCAACAAGCAGGAATCAAGAACATGTGATGCTCCACCCATTGACTTGTCAAAGCTCAATGGACCAGAGCATGAGAAAGTGGTGGATGAGATTGTTAGAGCAGCTGAGACTCTTGGCTTCTTTCAGGTGGTGAACCATGGTGTGCCTTTGGAGTTACTGGAATCACTTAAAGATGCAGCTCACAGATTCTTCAGTTTGCCACCTGAAGAGAAAGCTGTTTACTGCACTGGGGTGAGTCCTAGCCCAAAGGTGAAATATGGAACTAGCTTTGTGCCTGAGAAAGAGAAGGCCTTGGAATGGAAGGATTATATCAGTATGGTGGAAGTTGCACTTGAGTATTTGAAACTATCATCTAAGCTAGTCAGAGACATTGTGAAAGCCTTGATAAGTAAGCTTGGGATTACACTAGATGATTCAAAAATAGAGAGTCTCATTGGCATGAAGATGATTAACATGAATTACTACCCAGCATGTCCAAATCCTGAGCTCACAGTTGGTGTAGGTCGCCACTCTGACATGGGAGCCATCACAGTGCTGCTCCAAGATGGCATTGGAGGCTTGTATGTCAAAGTGGAATCAGAAGAAGAAGACAATGATGATTCTGAAAAAGGAGAGTGGTTGGAAATTCCACCTATCCATGGAGCTCTTGTCATCAATGTTGGTGATACCATACAGATACTGAGCAATGGGAAGTACAAGAGTGCTGAACACAGAGTGATGACAACTAGCACCCAATCCAGGGTATCAGTTCCAGTGTTTACTATGCCGGTGGCTACAGAAAAGATAGGTCCATTGGCAGAGGTGGTGAAGAAAGATGGCTTGGCACGTTACAGGGAAGTTGTGCTACAGGACTACATGAACAACTTCTTTGGGAATGCTCATGCTGGAAAGAAGTCTCTTGATTTTGCAAAGATCAACTAG 1053 0.4425 MAPTFSSSNSLYDFVVRDGNGVKGLVDSSVPEVPERYKQPPQERINKQESRTCDAPPIDLSKLNGPEHEKVVDEIVRAAETLGFFQVVNHGVPLELLESLKDAAHRFFSLPPEEKAVYCTGVSPSPKVKYGTSFVPEKEKALEWKDYISMVEVALEYLKLSSKLVRDIVKALISKLGITLDDSKIESLIGMKMINMNYYPACPNPELTVGVGRHSDMGAITVLLQDGIGGLYVKVESEEEDNDDSEKGEWLEIPPIHGALVINVGDTIQILSNGKYKSAEHRVMTTSTQSRVSVPVFTMPVATEKIGPLAEVVKKDGLARYREVVLQDYMNNFFGNAHAGKKSLDFAKIN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0325 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 184 300 IPR005123 -
Aed1g0325 350 Gene3D - 11 331 IPR027443 -
Aed1g0325 350 SUPERFAMILY Clavaminate synthase-like 21 338 - -
Aed1g0325 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 150 IPR026992 -
Aed1g0325 350 PANTHER SCOPOLETIN 8-HYDROXYLASE 3 341 - -
Aed1g0325 350 Pfam 2OG-Fe(II) oxygenase superfamily 193 299 IPR044861 -
Aed1g0325 350 MobiDBLite consensus disorder prediction 32 55 - -
Aed1g0325 350 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 3 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0325 Aed-Chr1 5051546 5053783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0325 21 349 Glycosyltransferase AT5G59530 33.053 1.44e-55 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0325 1 5051546 5053783 Aed1g0325 1 5051546 5053783 ECH