Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0321 ATGAAGGAAAGTGGTAGAAAACAAGGTACCATGTCTCCATGTGCAGCGTGCAAGCTTCTTCGAAGAAGATGCACTAGGGATTGCGTTTTTGCTCCTTATTTTCCTGCTGATGAACCCCAGAAGTTTGGTAGTGTTCACAAGGAATTACCTGAACACCAAAGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCCAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTTCAGCAACAAGTTGATGTGCTCCAAACCCAATTGGCACTTGCACAAGCAGAGGTTGTGCACATGAGAATGAGCCAATTCTCACCACCACAACCACCACCATCAGATCAACGACAACATCAACATCAAGAACAACCCTCATCATCACTAGTGCCTGATCCTCATCATGAACCCTCCAATTCATCATCAGAGAACTTGTACCACTCAACAAGCAACAGGTTCTTGTCATCACAAACCAAGTCCCTTTTTGGCATGGACATGGTCATTGATCAGGCCAACATGGTTCAATCCCTGTGGTCATACTAG 552 0.4547 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMSQFSPPQPPPSDQRQHQHQEQPSSSLVPDPHHEPSNSSSENLYHSTSNRFLSSQTKSLFGMDMVIDQANMVQSLWSY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0321 183 MobiDBLite consensus disorder prediction 119 149 - -
Aed1g0321 183 Pfam Lateral organ boundaries (LOB) domain 13 98 IPR004883 -
Aed1g0321 183 ProSiteProfiles LOB domain profile. 12 101 IPR004883 -
Aed1g0321 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 133 - -
Aed1g0321 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 133 - -
Aed1g0321 183 Coils Coil 80 100 - -
Aed1g0321 183 MobiDBLite consensus disorder prediction 105 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0321 Aed-Chr1 4997871 5004074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0321 1 182 AS2 family AT1G31320 53.608 5.98e-55 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed1g0321 LOB 1.8e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0321 1 4997871 5004074 Aed1g0321 1 4997871 5004074 ECH