Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0320 ATGCCCCTCTCACCATCTTCCATGGCTTCAACAATCCCACAACTATTCTATCCAAACTACACCTTCGCCACTCACCACCTCCACCACGACCTCTCGGATTTCCCCACCACCACACTCCTCAACAACAACGCCGCCACCGCCGTGTCGGTTATCGACAACAACAACAGCACCATGTGGGGTGGCCAAGACAGCTTGATACCCTTGCTGGACATGAGCAATGGCGCACTGGACCATATCGTGTCGCTCGATTGCGACGCCATGGCTTGCAGTGCTGCCAACTGGATGCCACCGTCGTCGTCGTTCTCCGACCAGCTCGGCGGGCTCTCGGAGTTGGCCATTTCGGACTGCAAAATGGGGTTCTACGGTGGAGGAGGGGGAGGGTTTCTTCAGAACTTCAACAACAACCACAGCAGATATAATAATAATAATAATAACAACCAGCTTCCACATGTTGTGGAGTTCGGAGATGAATGTTGTGGGTTTGTTGAGGATGTTAAGCCACACCCTTATCCTAATGCTGCAAGAGACAATTGGGGAATTCAAGGAAATCAAATGGCAGCAATTGAGGAGCCAAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGAAAAACCTTAGCTGATAGGCGAGTGAGGGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGAAGAAGACAACATGGCAACAAAAAAGCATGAGAATCATCATCTCCATAAAGAAGACTTTTATGGTGGCGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAAGATTGGCTTCAAGAGGCCATGGCAAGTTTAGTGTATTTATCTCATTCTTCACCGGAAGATATGTAA 918 0.4651 MPLSPSSMASTIPQLFYPNYTFATHHLHHDLSDFPTTTLLNNNAATAVSVIDNNNSTMWGGQDSLIPLLDMSNGALDHIVSLDCDAMACSAANWMPPSSSFSDQLGGLSELAISDCKMGFYGGGGGGFLQNFNNNHSRYNNNNNNNQLPHVVEFGDECCGFVEDVKPHPYPNAARDNWGIQGNQMAAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDNMATKKHENHHLHKEDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0320 305 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 300 - -
Aed1g0320 305 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 300 - -
Aed1g0320 305 Pfam CCT motif 203 245 IPR010402 GO:0005515
Aed1g0320 305 ProSiteProfiles CCT domain profile. 203 245 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0320 Aed-Chr1 4985559 4987311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0320 199 255 C2C2-CO-like Transcription Factor Family AT5G15850 47.368 1.97e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed1g0320 CCT 9.9e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0320 1 4985559 4987311 Aed1g0320 1 4985559 4987311 ECH