Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0283 ATGGGAGAAAAAGGAGAATCATCCAATTCAGTTATGCTAAGGCACGCAGAGAAAGAAGAAGCATTGATGAAGACAAATATTTCAGAGGATAAAGAAATAAAAAAGATCAAGCTGAAAACTTCAGATGAAGTCATCTTCGAGGTGGAGCCATCGATCGTGAAGAAGATGGAGACCGTGCAGGCCTTCATAGACGATGACGACACTGACAGCTCCACCATCATCCCACTCCACAGTGTCTCCAGCTGTGACCTCCGTCGAATCCTTGAATTGGAGTTTGAGGGATTCGATGGAGAGTTGGTGAAGACACTGGGCCTGGAGGAGCTGAAGGAGCTCCTCCTCGCAGCAGACTACCTCAACATGAAGAAACTGTTTGATTTTGTGGCCAGGAGGATTGCTGACTTCATCAAGAACAAGAGTCATGAGTATGTGAGGAAGCACTTCAATATTGAGAATGATTTTACACCCGAGGAAGAGGCCGAGGTTCGACAAAAACACGCATGGGCCTTTGATGGAGTCGATGAATGA 525 0.461 MGEKGESSNSVMLRHAEKEEALMKTNISEDKEIKKIKLKTSDEVIFEVEPSIVKKMETVQAFIDDDDTDSSTIIPLHSVSSCDLRRILELEFEGFDGELVKTLGLEELKELLLAADYLNMKKLFDFVARRIADFIKNKSHEYVRKHFNIENDFTPEEEAEVRQKHAWAFDGVDE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0283 174 SMART skp1_3 33 120 IPR001232 GO:0006511
Aed1g0283 174 Gene3D Potassium Channel Kv1.1; Chain A 91 171 IPR011333 -
Aed1g0283 174 Gene3D Potassium Channel Kv1.1; Chain A 29 90 IPR011333 -
Aed1g0283 174 SUPERFAMILY POZ domain 34 89 IPR011333 -
Aed1g0283 174 PIRSF SCF_Skp 14 90 IPR016897 GO:0006511
Aed1g0283 174 PIRSF SCF_Skp 88 171 IPR016897 GO:0006511
Aed1g0283 174 Pfam Skp1 family, dimerisation domain 121 168 IPR016072 GO:0006511
Aed1g0283 174 PANTHER SKP1 34 171 IPR016897 GO:0006511
Aed1g0283 174 SUPERFAMILY Skp1 dimerisation domain-like 94 167 IPR036296 GO:0006511
Aed1g0283 174 Pfam Skp1 family, tetramerisation domain 34 89 IPR016073 GO:0006511
Aed1g0283 174 PANTHER SCF UBIQUITIN LIGASE, SKP1 COMPONENT 34 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0283 Aed-Chr1 4549605 4550129 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0283 1 4549605 4550129 Aed1g0283 1 4549605 4550129 ECH