Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g0277 | ATGGAGCCATCGCAACTCTTACATGACCCAGCTTTCCCTCTCTTCAAAATCCCTCGCAAAACCTCCCTCGAACCCCTCTCACCAGCCGCAACCGCCATAACCACCGCAAACCCCACCTCTCGCGGCGAAGACCCCGAAGAAACCGCCGAGACGTTCGGCGACCTCGGGCTCGGTGAATGGGCGGCAAAGACGTGCCGGGAACTCGGGATGCGGCGGCCGCGTCCCGTGCAGAGCCGGTGCATCCCGCGCGTGCTGGAGGGCCGCCACGTGCTGGGCATCGACGAGACCGGGAGCGGGAAGACGGCCGCCTTCGCGCTCCCGATCCTGCAGCGCCTCGCCGAGCACCCGTTCGGCGTGTTCGCGCTCGTTGTGACGCCCACGCGCGAGCTCGCGTTCCAGCTCGCGGAGCAGTTCCGCGCACTCGGCTCCGCCGTGAACCTCCGCATCGCGGTGGTCGTCGGCGGGATGGACATGCTGAAGCAGTCCAAGGAGCTGGCCGCGAGGCCCCACCTCGTCGTCGCCACCCCCGGGAGGATCCACGCCTTGCTCCGCAATAGCCCTGATATTCCTCCCGTTTTCTCCAGAACCAAGTTCCTTGTCTTGGATGAAGCAGATCGAGTCCTGGATGTTGGTTTTCAGGAGGAATTGAGATTTATATTTCAGTGCTTACCAGAAAATCGACAAAACCTGTTCTTTTCTGCAACAACTACAAGTAATCTGCAAAAGTTGCGTGAACGTTACCAAGATAAGATGTATGTCTATGAGGCATATGAAGGCTTTAAAACAGTTAAAACACTTAAGCAACAGGCTATATTCATCCCTAGAATGGTGAAGGATGTGTATTTGATGCATATTTTGTCTAAACTGGAAGATATGGGAATTCGGTCTGCTATTGTATTTATCTCAACATGCAGAGATTGTCATCGTTTAAGTTTAATGCTCGACGTGCTTGATCAAGAAGCAGCAGCTCTATATTCATTCAAATCACAAGCTGATAGGCTTGAAGCACTTCATCAATTTAAATCGGGAAAGGTTCCTATACTTCTTGCAACTGATGTTGCCAGCCGCGGTTTGGATATTCCTACAGTTGACCTTGTTATCAATTATGATGTTCCAAGGTTTCCGCGAGATTATATTCATCGTGTAGGTCGTACAGCAAGAGCAGGTAGAGGGGGACTGGCTTTGAGCCTTGTCACCCAGAATGATGTTGATCTTATTCACGAAATCGAAGCTCTTATTGGGAAGCAACTTGAAATGATTGAATACAAAGAAAATGAGGCGCTTTCTCTCATGAAAAAGGTTTTCAGTGCCAAGAATGTGGCAGAAATGAGGATAATAGATGATGGCTTTGAGGAGAAAGCTAAAGAGCGGAAAAAACAGAAGATAAAAATGCTAGAAGAGAAAGGATTGTTAATGAAAAGTAGTAAAAAGAGAAAACGAAATAAAGAATTTGCAGAGGAAGGGAATGAACAAAAAAAAGAGGTTTTCAGTGCTAAGAAAGTGGTGGAAATGAAGACAGTGGATGAGGATGGCATTGAGGAGAAAGCAGAAGAGGGGAGAAAACAAAAACTGAAAATGCGAACAGAGAAAGGTTTGCTAAAGAAAAAAAAGTCAAAAGAAAGAAATAAAGAATTCGCAAAGGAAGGGAAAAAACAGAAAAAGGAGAAAGTTGAAGCATTAGCAGATATAGCAACTCCAAAGAAAAGGAGTAAGAAGAGACTGTAA | 1725 | 0.4783 | MEPSQLLHDPAFPLFKIPRKTSLEPLSPAATAITTANPTSRGEDPEETAETFGDLGLGEWAAKTCRELGMRRPRPVQSRCIPRVLEGRHVLGIDETGSGKTAAFALPILQRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVNLRIAVVVGGMDMLKQSKELAARPHLVVATPGRIHALLRNSPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLPENRQNLFFSATTTSNLQKLRERYQDKMYVYEAYEGFKTVKTLKQQAIFIPRMVKDVYLMHILSKLEDMGIRSAIVFISTCRDCHRLSLMLDVLDQEAAALYSFKSQADRLEALHQFKSGKVPILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIEALIGKQLEMIEYKENEALSLMKKVFSAKNVAEMRIIDDGFEEKAKERKKQKIKMLEEKGLLMKSSKKRKRNKEFAEEGNEQKKEVFSAKKVVEMKTVDEDGIEEKAEEGRKQKLKMRTEKGLLKKKKSKERNKEFAKEGKKQKKEKVEALADIATPKKRSKKRL | 574 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g0277 | 574 | SMART | ultradead3 | 69 | 269 | IPR014001 | - | |
Aed1g0277 | 574 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 288 | 428 | IPR001650 | - | |
Aed1g0277 | 574 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 50 | 78 | IPR014014 | GO:0003724 | |
Aed1g0277 | 574 | Coils | Coil | 536 | 556 | - | - | |
Aed1g0277 | 574 | Pfam | DEAD/DEAH box helicase | 75 | 243 | IPR011545 | GO:0003676|GO:0005524 | |
Aed1g0277 | 574 | SMART | helicmild6 | 308 | 389 | IPR001650 | - | |
Aed1g0277 | 574 | Gene3D | - | 28 | 254 | IPR027417 | - | |
Aed1g0277 | 574 | MobiDBLite | consensus disorder prediction | 509 | 574 | - | - | |
Aed1g0277 | 574 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 81 | 254 | IPR014001 | - | |
Aed1g0277 | 574 | CDD | SF2_C_DEAD | 266 | 398 | - | - | |
Aed1g0277 | 574 | Gene3D | - | 261 | 434 | IPR027417 | - | |
Aed1g0277 | 574 | PANTHER | ATP-DEPENDENT RNA HELICASE DDX49-RELATED | 48 | 482 | - | - | |
Aed1g0277 | 574 | PANTHER | RNA HELICASE | 48 | 482 | - | - | |
Aed1g0277 | 574 | MobiDBLite | consensus disorder prediction | 533 | 567 | - | - | |
Aed1g0277 | 574 | Pfam | Helicase conserved C-terminal domain | 292 | 389 | IPR001650 | - | |
Aed1g0277 | 574 | CDD | DEADc_DDX49 | 52 | 255 | - | - | |
Aed1g0277 | 574 | MobiDBLite | consensus disorder prediction | 509 | 526 | - | - | |
Aed1g0277 | 574 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 118 | 408 | IPR027417 | - | |
Aed1g0277 | 574 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 200 | 208 | IPR000629 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g0277 | Aed-Chr1 | 4532713 | 4537371 | Transposed |