Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0261 ATGGTTGTCATGGAAACTAGCAGAGTGAGAAAGAGTGTTGGGATACTTCTCCTCTACCTCACTTTGGCTTCCATTTCTCTCACTCATTGTGATGCAGATAGATCAATGAGACTATTGAGAGGGCCTAAACATGGAAGAAATGCAACCAACATGAGCCCAAAGAAGTTGAAAACGGTTAATCATTTTGATGTGAATCCAACCATATTCTCATCAAATGAACAACCCTATAGTCTTAGCTCCCCATTCTCTTTGCCCCCTTATGAATCACTTGCTCCGGAAAGCAGCCCTCCATTTTGTGTGCTTCCACCTCCAGGCACTCCTTCCACCAGCATTCCAACCACACCATCACCTCCAAGCCCAACAACCATAACACCAGGCCCACCAGAGTCCTTCCCCACACCAACCCCATATATAGTCCCAGGCTCACCTGGGATCACACCGGGCTCACCTGAGCCCATACTCAACCCTCCCATAATTATTCCAAGCCCACCTGACTCCTCAACGGGCTCACCCGGGATCACGCCAGGATCGCCTGATCTCAATCCTCCCATCATTGTTCCAAGTCCACCTGACTCCTCAACAGGCCCGCCCGGGATCACGCCAGGATCCCCTGATCTCAATCCTCCCATCATTATTCCAAGCCCACCTGACTCCTCAACAGGCTCACCTGGGATCACCCCAGGATCGCCCGATCTCAATCCTCCTATCATTGTTCCAAGTCCACCTGACTCCTCAATGGGCCCACCCTACTTTGAGCCCAGCCCGCCATTCATGATCCCTTCCCCCACTGGTGGTGGCATCCCTCCAGGCCCAGGCCCACCAAGCACTGTTCCATCCCCCAGTGAAGGCAATGTCCCAAGCCCAAGTGTGTTTCAGCCACCTGTGGTGTACCCTCCACCAAGTGTGCCACCACCACCACACTATGCACCAAGGACCACCTTGTGGTGTGTGGCTAAGCCCTCAGTCCCGGACCCAATCATCCAAGAGGCCATGAACTATGCTTGTTGGTCAGGGGCAGATTGCACCTCAATTCAGCCCAATGGGCCTTGCTATATGCCCGACACTGTGTATGCACATGCTTCATATGCTTTCAATAGCTATTGGCAAAGGACTAAAGGTGCCGGTGGCAATTGTGAATTTGGAGGGACGGCCATGCTGGTTGCTGTTGATCCTAGTGAGTACCCCTATCATCAAATGGGCTTTGATGGGTGCCACTTCATCTACAATTGA 1230 0.522 MVVMETSRVRKSVGILLLYLTLASISLTHCDADRSMRLLRGPKHGRNATNMSPKKLKTVNHFDVNPTIFSSNEQPYSLSSPFSLPPYESLAPESSPPFCVLPPPGTPSTSIPTTPSPPSPTTITPGPPESFPTPTPYIVPGSPGITPGSPEPILNPPIIIPSPPDSSTGSPGITPGSPDLNPPIIVPSPPDSSTGPPGITPGSPDLNPPIIIPSPPDSSTGSPGITPGSPDLNPPIIVPSPPDSSMGPPYFEPSPPFMIPSPTGGGIPPGPGPPSTVPSPSEGNVPSPSVFQPPVVYPPPSVPPPPHYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYMPDTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSEYPYHQMGFDGCHFIYN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0261 409 PRINTS Proline rich extensin signature 139 156 - -
Aed1g0261 409 PRINTS Proline rich extensin signature 100 121 - -
Aed1g0261 409 PRINTS Proline rich extensin signature 85 97 - -
Aed1g0261 409 PRINTS Proline rich extensin signature 171 196 - -
Aed1g0261 409 PRINTS Proline rich extensin signature 121 137 - -
Aed1g0261 409 Pfam X8 domain 314 385 IPR012946 -
Aed1g0261 409 MobiDBLite consensus disorder prediction 93 292 - -
Aed1g0261 409 MobiDBLite consensus disorder prediction 93 164 - -
Aed1g0261 409 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 232 409 - -
Aed1g0261 409 SMART X8_cls 314 406 IPR012946 -
Aed1g0261 409 Gene3D - 310 399 - -
Aed1g0261 409 MobiDBLite consensus disorder prediction 228 281 - -
Aed1g0261 409 MobiDBLite consensus disorder prediction 176 216 - -
Aed1g0261 409 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 232 409 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0261 Aed-Chr1 4347369 4349997 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0261 1 4347369 4349997 Aed1g0261 1 4347369 4349997 ECH