Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0254 ATGTCAGCACTGAATCTTTGCCGCATGGCACTTCGATCCTCGAAGCTTCTCTCTCGCCCTTATCATCTTCTCTCTGTTCAGTTGCAGATGCAGATGCAGCCCTCTTCTCCTCCCCTCACTCGAAAGATGAGCATGGATGCACAGAGTATTGCTTCCCGTCTTAATAGTTCTGGGTTGTTGAGGACTCAGGGCCTTATTGGAGGGAAATGGAGTAATGCTTATGATGGAAAAACCATAAAGCAAAGTACAATGGAAGAGGGGCGGCATGCACTTGCTGCTTCATGGTCTGTTGATGCTGCTGGTGATCATAGTCTAAAGATGCAGCCTGATGACTTGCGTAAAATAAACTATGGAGCGGCCTTTATTGAGTTTGCAGCTGAGGAGGCAAAACGATCCAAGGTGGCACTTAACTCAGCAAATGGAAAGCGTATCCCTGTCGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCATAAAGCCATCTGAAGTTACGCCTCTCACTGCTTTAGCTGCAGCAGAACTTGCCATTCAAGCTGGAATACCGCCGGGTGTTGTGAATGTGGTAATGGGAAACGCTCCTGATATTGGGGATGCTCTACTTGCAAGTCCACAGGTAAGAAAGATCACATTCACTGGTTCGACTGCTGTTGGGAAGAAATTGATGGCTGGTTCAGCTGAGACAGTTAAAAAAGTATCTCTGGAACTTGGTGGAAATGCGCCATGCATTGTTTTTGATGATGCTGACCTGGATGTTGCAGTAAAAGGAACTTTTCTTTGTGAAGGAATATATGAGAAGTTTGCAAATACTTTGCGTGATGCTGTTCAGGATATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGGCACAGGTTGAGTCCTTAATTCAGGATGCTACATCGAAGGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCCACGGTCATCAGTGATGTCACCAATGATATGCGCATATCAAGGGAGGAAGCATTTGGACCTGTTGCACCTCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAACGACACAAATGCAGATCAAGTATGTGTGCTTGGGAAACATGAACAAAGAATGAAGTATGAGACGGTACCAAGCTAA 1152 0.4514 MSALNLCRMALRSSKLLSRPYHLLSVQLQMQMQPSSPPLTRKMSMDAQSIASRLNSSGLLRTQGLIGGKWSNAYDGKTIKQSTMEEGRHALAASWSVDAAGDHSLKMQPDDLRKINYGAAFIEFAAEEAKRSKVALNSANGKRIPVVGPALACGCTVVIKPSEVTPLTALAAAELAIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTFLCEGIYEKFANTLRDAVQDMKVGDGFSEGVAQVESLIQDATSKGAKVILGGKRHSLGFTFYEPTVISDVTNDMRISREEAFGPVAPLLRFKTEEDAIRIANDTNADQVCVLGKHEQRMKYETVPS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0254 383 SUPERFAMILY ALDH-like 59 364 IPR016161 GO:0016491
Aed1g0254 383 Pfam Aldehyde dehydrogenase family 147 257 IPR015590 GO:0016491
Aed1g0254 383 Pfam Aldehyde dehydrogenase family 259 363 IPR015590 GO:0016491
Aed1g0254 383 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 143 255 IPR016162 GO:0016491
Aed1g0254 383 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 256 363 IPR016163 GO:0016620
Aed1g0254 383 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 114 363 - -
Aed1g0254 383 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 114 363 - -
Aed1g0254 383 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 234 241 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0254 Aed-Chr1 4289187 4304352 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0254 1 4289187 4304352 Aed1g0254 1 4289187 4304352 ECH