Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0235 ATGGGGAACCTCTTCGGCAAAAATAAAAAGCGTGGCACTCAAAGTGCCAACAATAATAAAGGAAGAGACGGAAGAATCTACACAACCGTGACCACGAGAGGATTACCACCACATTTTCCAACTCGACCACAGCCTCTGCCGCTATTGTATCCGACTCTCCAACCTCCTTTGTCACCACCGCCACCATCACGGTCAGCAGCACCATCATTAGCACCGTCGCAATCCATGCCCAAGAAACCAAGCTTTGCGAAAGTTTTCTCTAAACAAAGCTCTTCAGTCATGAATAATAAAAAGCAATCTACCAAGAAGTATGCTTTGATTCGTGATAACTTCTCTACCCTTGAACAGGTGACAACAGCCTTGAGGAAAGAAGGATTAGAATCATCAAATCTCATCCTTGGAATTGATTTTACAAAGAGCAATGAATGGACTGGCAGAATCTCATTCAATAAAAGAAGCCTGCATGCTATTGGAAGTACACCCAACCCTTATGAGAAGGCCATTTCTATTATTGGCAAGACTTTGGCTCCCTTTGATGATGATAACTTGATTCCATGCTTTGGCTTTGGTGATTCTACCACCCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCATTCACCTTGCCATGGCTTTGAGGAAGTTTTGGCTTGCTACCAGAAAATAGTTCCAAACTTGAAACTTTCAGGGCCAACTTCTTATGCTTCTGTGATTGAGGCTGCTATAGACATTGTTGAGAAAAATCGAGGCCAATTTCATGTGTTGGTTATAGTTGCCGATGGCCAGAAGACAATTAAAGCAATTGTTGATGCAAGTGCATATCCACTTGCAATAGTTCTGGTTGGAGTTGGTGATGGACCTTGGGAAGACATGAGAAAATTTGATGACAGGTTACCGGCACGTGATTATGACAATTTTCAGTTTGTTAATTTCACGGAAATCATGTCGAAAAACATAAGCCCCTCGGAGAAAGAAACAGCTTTTGCTCTAGCTGCTCTCATGGAGATCCCCTTCCAATATAAAGCAACCATGGAATTTGGATTACTCGGACGGGTAACAGGAAGAGCAAAGAGGATAGTTCCAAAACCTCCTCCTGTTCCTTATTCTAGGCTTGCACCGCCGCCATTACTGCCACAACCACCGGCGCGTGTACTGAGCAATACGGCAGCATCCTCCGGAGATGAGCAAAACCAATCGACTTGCAGAGAGTGTGGAAACAAATTAACTAATTGTCCCATGTGCCGAGAAAGGATCACTAGTCGTCTCAGGGTGTACAGTGGGTGA 1284 0.4385 MGNLFGKNKKRGTQSANNNKGRDGRIYTTVTTRGLPPHFPTRPQPLPLLYPTLQPPLSPPPPSRSAAPSLAPSQSMPKKPSFAKVFSKQSSSVMNNKKQSTKKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDSTTHDQEVFSFHSDHSPCHGFEEVLACYQKIVPNLKLSGPTSYASVIEAAIDIVEKNRGQFHVLVIVADGQKTIKAIVDASAYPLAIVLVGVGDGPWEDMRKFDDRLPARDYDNFQFVNFTEIMSKNISPSEKETAFALAALMEIPFQYKATMEFGLLGRVTGRAKRIVPKPPPVPYSRLAPPPLLPQPPARVLSNTAASSGDEQNQSTCRECGNKLTNCPMCRERITSRLRVYSG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0235 427 MobiDBLite consensus disorder prediction 363 401 - -
Aed1g0235 427 MobiDBLite consensus disorder prediction 384 401 - -
Aed1g0235 427 SUPERFAMILY vWA-like 129 295 IPR036465 -
Aed1g0235 427 MobiDBLite consensus disorder prediction 8 26 - -
Aed1g0235 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 426 IPR013083 -
Aed1g0235 427 MobiDBLite consensus disorder prediction 1 97 - -
Aed1g0235 427 MobiDBLite consensus disorder prediction 38 67 - -
Aed1g0235 427 Pfam Copine 153 349 IPR010734 -
Aed1g0235 427 PANTHER COPINE FAMILY PROTEIN 1 1 426 - -
Aed1g0235 427 SMART VWA_4 128 313 IPR002035 -
Aed1g0235 427 MobiDBLite consensus disorder prediction 363 381 - -
Aed1g0235 427 PANTHER UBIQUITIN-PROTEIN LIGASE RGLG2-LIKE PROTEIN, PUTATIVE-RELATED 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0235 Aed-Chr1 3927522 3935487 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0235 1 3927522 3935487 Aed4g1293 4 14567348 14577357 PCT