Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0205 ATGAAGTATGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGTTAATCCTCAAGGCCTGTGGTCTTAGAGTTACCTCTATCAAGATTGACCCCTATTTGAACACTGATGCGGGAACAATGTCTCCTTTTGAGCATGGAGAGGTTTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGCAACTATGAACGTTTCTTGGACATCAAATTAACCCGTGACAATAATATCACTACTGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGGCGTGGAGATTATCTTGGAAAGACTGTACAGGTTGTTCCACACATTACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCAAGGATACCGGTTGATGGGAAAGAAGGGTCAGCTGATGTCTGCGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCGTACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCCTCGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGCCAGCTTAGAGGTTTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGACGTTCCAAATATCTGGCACATTCCATTACTATTGAAAGATCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTACAAGGACAAGAGTTTATGACAGATGTCAGGAAGTTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGTTGCTCGTAACCGTAAACTTGTTGTGGACTGGGTTCCGGCTGGGGATCTTGAAGATGCTACTAATATGGAGGATCCCGAGGCATATAAAGCTGCTTGGAGTCTGTTGAGGGGTGCTAATGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGGGAAAATAATATTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTATGCAAGATCCGTTCTTGGTCTGCACGATGCTACAAGCACAGAGTTTAATCCTGAAGCCAGGACCCCTTGTGTCGTCTTCATGCCAGAGGGCTCAAAGACTCACATGGGAGGAACTATGCGACTTGGTTCCAGAAGAACTTACTTTGAAGTTGATGACTGCAAATCCGCAAAATTGTATGGCAATGTAAGCTTTATTGATGAGCGACATCGGCATAGATATGAGGTTAATCCTGACATGATATCACAGCTAGAGAATGCTGGTCTATCTTTCGTTGGCAAAGATGAAACTGGGAGGCGCATGGAGATAGTTGAATTGCCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGCAAACCTTCTCCACTATTCTCAGCATTGGACCCCATCATCTGGGTTTCTAATTCTAACTCAACAGCTACTGCTCTGAATCTGAACCTTTAA 1689 0.4423 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVARIPVDGKEGSADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTTRTRVYDRCQEVVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLVVDWVPAGDLEDATNMEDPEAYKAAWSLLRGANGVLVPGGFGDRGVQGKILAAKYARENNIPFLGICLGMQIAVIEYARSVLGLHDATSTEFNPEARTPCVVFMPEGSKTHMGGTMRLGSRRTYFEVDDCKSAKLYGNVSFIDERHRHRYEVNPDMISQLENAGLSFVGKDETGRRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSALDPIIWVSNSNSTATALNLNL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0205 562 Gene3D - 295 544 IPR029062 -
Aed1g0205 562 TIGRFAM PyrG: CTP synthase 1 541 IPR004468 GO:0003883|GO:0006221
Aed1g0205 562 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Aed1g0205 562 Gene3D - 1 292 IPR027417 -
Aed1g0205 562 PANTHER CTP SYNTHASE 1 542 - -
Aed1g0205 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Aed1g0205 562 CDD GATase1_CTP_Synthase 298 542 IPR033828 GO:0003883|GO:0006241
Aed1g0205 562 Coils Coil 552 562 - -
Aed1g0205 562 PANTHER CTP SYNTHASE 1 542 IPR004468 GO:0003883|GO:0006221
Aed1g0205 562 SUPERFAMILY Class I glutamine amidotransferase-like 298 542 IPR029062 -
Aed1g0205 562 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Aed1g0205 562 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Aed1g0205 562 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Aed1g0205 562 Pfam Glutamine amidotransferase class-I 309 541 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0205 Aed-Chr1 3504821 3512464 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1322 4 15892057 15900903 Aed1g0205 1 3504821 3512464 PCT