Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0199 ATGACATCAAATCCTGTTAAGATGCCTGATTTACCTGAGACACAGATGGAGAACAACTTGTCAGAAGAGAAACACCCTAGTGGTCATAGTAGCAGTGCAAATTCAGGAAACAACTCACCGACTCATCCCAAGAATGTGAACAACCAAGAAGCAAAAGAGACCAGCACAACAACAAGTGAAACTGGACAAGTGAACCAGGTTTCCAAAACTGATGCAAAGTCGGAAGGAAAATCCAGACCCCAGAAGCTAATGCCACCAAACAGAAACTTCTCTGATTTCAACCCTCAACAAAGTCCAAGCACAATGAGACCTAATTCAACTTCTGTGTCTACACCTCATACAAAAACCAGTACCAACCAAGGCCATGGGAGTGGTTCTAGTTCTCGCAGTGACAGCTTAGACAGCACAAGTGCACCCATTAGGCCACACACGGGGGGTGATGTGAGGTGGGAAGCTATTAACATGGTTTCAAGGGTTTCTCCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGCGACATTGGAAGTGTGTACCTTGTGGAACTCAAGGGGACTAAGACCTACTTTGCTATGAAAGTAATGGACAAGGCAGCTCTTATAAGCAGGAATAAGCTTCTGAGGGCACAAACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTATTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTTAGACAGAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTTTGCTTCAGAGGTTTTGTTAGCTCTGGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATCATGCTCTCGGATTTTGATTTATCCCTCCGCTGCTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCATGCAAGCAACAGTAGTGGTGGTGGCAACAACGAAACTGGTGTACTAACCGATGACCAAGTAGTGCCAAGCACTACTCAGACATCGAGTTTTTTCCCGCGCATTTTGCCTTCGAAGAAGAACCGCAAGGCGAAGTCAGACTTCGGCCTGTTGGTTGGTGGAGCCCGCCTCCCTGAACTGATGGCAGAACCGACAAATGTTCGTTCGATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATCATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGTATCTTCTTGTATGAGCTGTTGCATGGAACAACACCTTTCAAGGGTGCAGGATACAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCTCAAGTTAGTGCTGTGGCTAAAGACCTTATCAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATACAAGAGAGGAGCTACAGAGATAAAACAGCACCCTTTTTTTGAGGGAATGAACTGGGCCCTAGTTAGAAGTGCCACACCTCCTCACATACCAGAAGCTATAGACTTCTCAAAGTATGCTAGCAAAGACACAGCACCAGCAGACAAGAAGATGGCAGCTGTTGCTAATGATAAACACAGCAACACTGCTGCTACTGATTCTTCTAACATGGATTTTGAGTATTTTTAG 1689 0.4541 MTSNPVKMPDLPETQMENNLSEEKHPSGHSSSANSGNNSPTHPKNVNNQEAKETSTTTSETGQVNQVSKTDAKSEGKSRPQKLMPPNRNFSDFNPQQSPSTMRPNSTSVSTPHTKTSTNQGHGSGSSSRSDSLDSTSAPIRPHTGGDVRWEAINMVSRVSPLNLSHFRLLKRIGYGDIGSVYLVELKGTKTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFFASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHASNSSGGGNNETGVLTDDQVVPSTTQTSSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQVSAVAKDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEAIDFSKYASKDTAPADKKMAAVANDKHSNTAATDSSNMDFEYF 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0199 562 ProSiteProfiles Protein kinase domain profile. 167 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0199 562 Gene3D Transferase(Phosphotransferase) domain 1 395 519 - -
Aed1g0199 562 Pfam Protein kinase domain 392 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0199 562 Pfam Protein kinase domain 168 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0199 562 MobiDBLite consensus disorder prediction 1 145 - -
Aed1g0199 562 PANTHER FLIPPASE KINASE 1-RELATED 24 562 - -
Aed1g0199 562 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 24 562 - -
Aed1g0199 562 MobiDBLite consensus disorder prediction 25 71 - -
Aed1g0199 562 Gene3D Phosphorylase Kinase; domain 1 165 250 - -
Aed1g0199 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Aed1g0199 562 MobiDBLite consensus disorder prediction 84 139 - -
Aed1g0199 562 SUPERFAMILY Protein kinase-like (PK-like) 164 525 IPR011009 -
Aed1g0199 562 SMART serkin_6 167 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0199 562 Gene3D Transferase(Phosphotransferase) domain 1 251 321 - -
Aed1g0199 562 CDD STKc_phototropin_like 165 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0199 Aed-Chr1 3460738 3466047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0199 133 562 AGC Kinase Gene Family AT1G79250 72.506 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed1g0199 Pkinase 5.3e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0199 1 3460738 3466047 Aed4g1316 4 15739962 15743192 PCT