Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0128 ATGAGAACTAAAAGTGCTTCTCTCTTCTGTCTTCTATTATCTCTTGGTATTCTTTTTGCTAATGGCATTGCTGCAAGTGCAATTCCAAGTCACCATGCTTCATCATTCAACAGAAGCCTTTTTCCTTCCACTTTTCTCTTTGGAATAGGTTCTTCTGCATATCAGGTAGAAGGAGCAGCAAATGAAGATGGAAGAGGACCAAGCATATGGGACACCTTCACTAATGAACATCCTGAAAAGATTTGGGATCATAGCACTGGTGAAGTGGGAGCTGATTTTTATCATCAGTACAAGAGTGATATAAAATTGGTGAAAGAAATTGGGCTGGACTCCTTCAGATTCTCCATCTCTTGGACACGAATATTCCCCAAGGGCAAAGGAGCTGTTAATCGCTTGGGTGTTAAATTCTACAACAATCTCATCAATGAGATTCTATCAAATGACTTGAAACCTTTTGTCACTCTTTTCCATTGGGACTTCCCACAAGCTCTTGAGGATGAGTATGGGGGATTTCGTAGTCCTAAAGTAGTGTCGGATTTTCGTGAGTATGCTGATTTTTGCTACAAGACATTTGGAGACAGAGTGAAGCATTGGGTGACTCTGAATGAACCCTTCTCATATAGCATAAATGGCTACAATGGTGGCACATTTGCACCAGGTCGATGTTCTAAGTACGTTGCCAATTGCAGTGACGGTGACTCAGCCACTGAACCCTACATCGTTGGACACTACTTGTTACTTGCTCATGAGGCTGCTGCCACATTGTACAAGAAAAAATACCAGGCTGCAAATAGAGCTCTGGATTTTTTCTTTGGTTGGTACGTATTTCTCATAATAAGACAAAAAAATGCTGCACCAGTAAGAGCCAACAGAACCTTCAACACAGATATGCTGGTCACTCTTAGCACGGAAAAGAATGGCGTAGCAATTGGGACCCCGACTGATTTGGATTGGCTCTACATCTATCCAAAAGGAATTCATCTTCTTATGGCACACATAAAGGATAAATACAAGAATCCAAATATTTACATCAACGAAAATGGCATTGCTAAAGCCAGGAATGACTCAATTGCAGTCAATGAAGCCCTTATGGATGGTATCAGGATTAGATACCTTAAGAGTCACCTTACATTCCTTCTTCAAGCTATCAAGTGA 1155 0.4095 MRTKSASLFCLLLSLGILFANGIAASAIPSHHASSFNRSLFPSTFLFGIGSSAYQVEGAANEDGRGPSIWDTFTNEHPEKIWDHSTGEVGADFYHQYKSDIKLVKEIGLDSFRFSISWTRIFPKGKGAVNRLGVKFYNNLINEILSNDLKPFVTLFHWDFPQALEDEYGGFRSPKVVSDFREYADFCYKTFGDRVKHWVTLNEPFSYSINGYNGGTFAPGRCSKYVANCSDGDSATEPYIVGHYLLLAHEAAATLYKKKYQAANRALDFFFGWYVFLIIRQKNAAPVRANRTFNTDMLVTLSTEKNGVAIGTPTDLDWLYIYPKGIHLLMAHIKDKYKNPNIYINENGIAKARNDSIAVNEALMDGIRIRYLKSHLTFLLQAIK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0128 384 PANTHER BETA-GLUCOSIDASE 17 288 384 - -
Aed1g0128 384 Gene3D Glycosidases 265 384 - -
Aed1g0128 384 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 45 59 IPR033132 -
Aed1g0128 384 PANTHER BETA-GLUCOSIDASE 17 10 263 - -
Aed1g0128 384 PANTHER GLYCOSYL HYDROLASE 10 263 IPR001360 GO:0004553|GO:0005975
Aed1g0128 384 Pfam Glycosyl hydrolase family 1 39 264 IPR001360 GO:0004553|GO:0005975
Aed1g0128 384 Pfam Glycosyl hydrolase family 1 303 383 IPR001360 GO:0004553|GO:0005975
Aed1g0128 384 PANTHER GLYCOSYL HYDROLASE 288 384 IPR001360 GO:0004553|GO:0005975
Aed1g0128 384 Gene3D Glycosidases 26 264 - -
Aed1g0128 384 SUPERFAMILY (Trans)glycosidases 31 384 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0128 Aed-Chr1 2494001 2500589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0128 1 383 Glycoside Hydrolase AT5G44640 42.795 5.40e-117 348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0128 1 2494001 2500589 Aed4g1322 4 15892057 15900903 PCT