Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0873 ATGAAACTCACTTTCCTTCTTTCTTTCTTATTCTTCACATTCACACTCTCCCATCTCACCCTAATCGTCACCGCTGGCAACCGTTACGGCGGTTCCGGCGAAACTTCTGGCAACGCCGACTTCATCCGTGCGAGCTGCAACGCGACGCTCTACCCCGACCTCTGTTTCTCCTCCCTCTCCCGCTACGCCGCCACCGTGCAGCGCAGCCACGCCTCCCTCGCGCGTGTCGCCGTCGCGGTGTCCCTCTCGAAGGCGCACGGCGCGGCGGCCTACCTCTCGCACCAGACCGCAGCGGCCGGCGACGACGACTCCGGCTCCGGCGCCGCCCTTCACGACTGCTTCTCGAACCTCGAGGACGCGGTGGACGAGATCCGCGGCTCGCTGAAGCAGATGCGCCGGCTCAGGCCGGTATCCGGCGAGAACTCCGACTCGGTCCGGTTCGGGCTGAGCAACGTGATGACGTGGATGAGCGCGGCCCTCACGGACGAGGAGACGTGTACGGACGGGTTCGAGGGCGTAGAGGAAGGTCCCGTGAAGACGACCGTATGCGATCGTGTCACCAGGGTTAAGAAGTTCACTAGTAATGCCTTGGCGCTCGTTAACGGTTTCGCTAATAACTTATAA 624 0.6218 MKLTFLLSFLFFTFTLSHLTLIVTAGNRYGGSGETSGNADFIRASCNATLYPDLCFSSLSRYAATVQRSHASLARVAVAVSLSKAHGAAAYLSHQTAAAGDDDSGSGAALHDCFSNLEDAVDEIRGSLKQMRRLRPVSGENSDSVRFGLSNVMTWMSAALTDEETCTDGFEGVEEGPVKTTVCDRVTRVKKFTSNALALVNGFANNL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0873 207 Pfam Plant invertase/pectin methylesterase inhibitor 40 199 IPR006501 GO:0004857
Aed11g0873 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 203 IPR035513 -
Aed11g0873 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 206 - -
Aed11g0873 207 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 5 206 - -
Aed11g0873 207 SMART PMEI_2 37 199 IPR006501 GO:0004857
Aed11g0873 207 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 201 IPR006501 GO:0004857
Aed11g0873 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 203 IPR035513 -
Aed11g0873 207 CDD PMEI-like_3 44 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0873 Aed-Chr11 13746989 13747612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0873 14 207 Carbohydrate Esterase AT5G53370 29.612 4.97e-15 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0873 11 13746989 13747612 Aed11g0873 11 13746989 13747612 ECH