Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0793 ATGGAGGCGCAACCCACTCCTCCGGCACCACCGCCGCCACCTGACTCGGTGGATTCCTCCCCACGCGCCTCCTGGGACGAGCCCTTTCCTCCTCCGAGCTCCTCCGCCAAGCTCCGGCTTATGTGCAGCTACGGCGGCCACATCGTGCCCCGCCCCCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACCCGCATCGTGGTGGTCCCCCGCCACACCTCCCTCCTGGACCTCTCCACGCGCCTCTCGAAGTCGTTCCTCCACGGCCACGCGCGCCCCTTCGTCCTCAAGTACCAGCTCCCCAGCGAGGACCTCGACTCCCTCGTCTCCGTCACCAGCGACGAGGACCTCGAAAACATGATCGACGAGTACGAAAACAACAACAACAACAGCAACAACAACAAACCCTCGCGGATTCGCCTCTTCCTCTTCCCGTCGGCCCATGGGTCCGACGGGTCCATGGGCCTGGGCTCAGCCAAGTCCGAGGAGTGGCTCAGTGGGTCCCTCGATGGAGGGACCCTGTCGGAGTCCGCCTCCGTGAATTGCCTCCTCGGACTCGACGAAGAGGCTGTTGCTGCTGCCGCTGCCGCGAACGGTAACGGTAACGGAAAAGTTCTCAGCAAGGTGTCGGATTCCTCGGCTATGCTGGAGAGCGTTTCGTCTTTCGGGTCTGGTTCCTCTGTGCCGAATTTGCCCCCCATAAAGGTTCACGTGGTGGAGGATCAGAAGGGGGTGGTGGGGATTGAGGAACAGTTTGTTCAGCTGGGTGTGGGACAGAAGCAGCAGCAAGAAGAGGGTTTTGTTGTGGCTGCGGTGACAACGACGACGGAGTTTGCGGCGGCGAACCGGCTTGTCTCCGATGACGAGAGATCCGATCATGGGGTTCCACTGGGGTATAGAAAATCGCCAACCCCGCCACCTCAGCCTCAGTCTTCCCAATTTCAACAGAAATCACCTGGTGTTGTTGATTTGCCTTCACCTGATTCACTTTCAAGTGATAGTAGTCTTTCAAATGCAATGTTGCGCCCAAAACCAGCAGCAATCTATCAAGACCAAGTTCAAATTCAATCTGGAAATTCTCAGGTTCCTAGCAACACCTTGGTTGATCCAAAGCTTAATGTGACTGATCAACAAGGTTGGATTCAGATGCCGCAGCAGCATCAGACTCAACAGCCACAGCATCAGCATCAGACTCAACAGCCACAGCATCAGCATCAGCAGTATATCCACAACACACATTTAGTTCACCATGCTCCTTCAGGGCCTGTGCAAATCCCTGCTTCATACTATCCTGTATATCAGCAACAACTCCATCCCCAACAACATCACCATCACCTTGATCAACAATACCCTGTTTACTACGTGCAGGCAAGACAGGCCCAAGCATACAACATGTCGGTGCAGCCGACTAATGTAGCCGAATCTGCAACAACTATCCCTTCTAACCAGTCCCAAAATCAGCCAAATTCCACTGCTTACAACCAATCAAGGAACCCTAATTCTGAAATGGCAGCAGGCACATACAGAACTGCACCTGCCACCCCTCAATTGGTTCAAGTTCCTTCTAGTAAACATCAACAACAGCAATACGTTGCTTACTCTCAAATTCACCATCACCATCCTCAATCGGTGCCACCTCCTAATTCTGCAGTACCTGCTAGTTATGCTTACAACTATGCAGATCCTGCACATACTCAAGCTCAAGCTCAAGCTCAAGTATTCTATACTCAACCTTTGGCACCCTCCATGCCTTCACAGTACCAGACCATGACAACTGCTGCTGCTGCAATGCGGCCGGAAGTTTCCGCTCAGCTTCCCTTGGATGGCATGAAGCAGCAGGTGAGAACCTCGCAGCCACTGTGA 1863 0.5427 MEAQPTPPAPPPPPDSVDSSPRASWDEPFPPPSSSAKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVPRHTSLLDLSTRLSKSFLHGHARPFVLKYQLPSEDLDSLVSVTSDEDLENMIDEYENNNNNSNNNKPSRIRLFLFPSAHGSDGSMGLGSAKSEEWLSGSLDGGTLSESASVNCLLGLDEEAVAAAAAANGNGNGKVLSKVSDSSAMLESVSSFGSGSSVPNLPPIKVHVVEDQKGVVGIEEQFVQLGVGQKQQQEEGFVVAAVTTTTEFAAANRLVSDDERSDHGVPLGYRKSPTPPPQPQSSQFQQKSPGVVDLPSPDSLSSDSSLSNAMLRPKPAAIYQDQVQIQSGNSQVPSNTLVDPKLNVTDQQGWIQMPQQHQTQQPQHQHQTQQPQHQHQQYIHNTHLVHHAPSGPVQIPASYYPVYQQQLHPQQHHHHLDQQYPVYYVQARQAQAYNMSVQPTNVAESATTIPSNQSQNQPNSTAYNQSRNPNSEMAAGTYRTAPATPQLVQVPSSKHQQQQYVAYSQIHHHHPQSVPPPNSAVPASYAYNYADPAHTQAQAQAQVFYTQPLAPSMPSQYQTMTTAAAAMRPEVSAQLPLDGMKQQVRTSQPL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0793 620 MobiDBLite consensus disorder prediction 283 337 - -
Aed11g0793 620 Gene3D - 57 145 - -
Aed11g0793 620 SMART PB1_new 52 144 IPR000270 GO:0005515
Aed11g0793 620 SUPERFAMILY CAD & PB1 domains 53 150 - -
Aed11g0793 620 Coils Coil 114 134 - -
Aed11g0793 620 Pfam PB1 domain 53 145 IPR000270 GO:0005515
Aed11g0793 620 CDD PB1_UP2 41 144 - -
Aed11g0793 620 MobiDBLite consensus disorder prediction 1 33 - -
Aed11g0793 620 MobiDBLite consensus disorder prediction 1 18 - -
Aed11g0793 620 PANTHER EXPRESSED PROTEIN 1 611 - -
Aed11g0793 620 MobiDBLite consensus disorder prediction 383 404 - -
Aed11g0793 620 ProSiteProfiles PB1 domain profile. 37 146 IPR000270 GO:0005515
Aed11g0793 620 MobiDBLite consensus disorder prediction 313 337 - -
Aed11g0793 620 MobiDBLite consensus disorder prediction 473 505 - -
Aed11g0793 620 PANTHER OS05G0427100 PROTEIN-RELATED 1 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0793 Aed-Chr11 11793509 11796871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0793 33 187 MAP Kinase Kinase Kinase AT1G79570 38.854 1.59e-25 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0793 11 11793509 11796871 Aed11g0793 11 11793509 11796871 ECH
Aed11g0793 11 11793509 11796871 Aed7g0246 7 1729962 1732432 ECH