Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0760 ATGGCTGCCTACTCCATGTTTGGCTTCCATTTTCTACGCTCTTGTTTCATGCTTCTAGTCTTGGCTGCGGCTCAAAAGGACGAAAATTATGAGGAATGTCTAGTGTCTCAACCCTGTGGATATCTCGGGGATATCAACTTCCCCTTCACAACAAGACCAAGATGTGGGCTGCTGCAAATAGAGGGGTGTGAGGACCCCGGTGCAGTTAAAAAAATCCAACTAACAACAGACCCGCAACGGTATCAAATCGATACCTTATTGAACATCGCCAGCCCCGAGTACCGTTCAATTTTCATCCATCGCACCGAATATCCCGATCCATTTGCTTCAAAGACGCTCAAACCGTATTTTAAGATAATTAACAACATTTCCTTCTTCCGATGCACTTCAGACCTCAATATCCTTAATCATACAATGTCTTTATATAGAAAGTGTCCTTCCTACTATATCTACTTCAATTTTTCATCTGAATATGAACATGGTGTTCCCACCCATCTCTTACCTTTCCGCATGCCCATCCTTCCATTTGCATGTTTACTTAACCAGTTTCCTCCAATCAACCAAGTATCCGTCCCCACTTGCCCTTCATGTACATTCTTATTTTCTTTTCTCGAAATTAAAAGAAAAAAACCTTCAGGCCTTAAAAACCAAACAAGAAGCGCTTATTCTGCTTCCTTCATAGAAAGTGGAGCAGTCTACTTTGGGATCCCCATCTTCTCCTATGAGGAGCTCCAGAAGGCAACCAACAATTTTGACCAAGCTAGGGAGCTTGGAGAAGGAGGCTTTGGAACTGTCTACTACGGAAAGCTTGCAGATCAGCGTGAAGTTGCAGTGAAGCGCCTATTTGAGCGCAACTACAGGCCAGTGGAGTCATTCATCAACGAAATCCAGATCCTCACACGCCTGCGCCACCAAAACCTCGTGCCCCTGTACGGTTGCACTTCGCGTCACAGCCGCGAGTTACTGCTAGTGTATGAGTACATCCCAAACGGCACCGTTAATTCCCATCTCCACGGCGATCAAGCAAAGCCGTGCTCGTTGCCATGGCTTATCCAAAAGGGGGCGTTTTGTGACTTGGTTGATCCTTTTCTTGGTTTCCAGACTGATGAAAAATTGAAAAGGATGATTGTTTCTGTGGCGGAGTTGGCTTTTCAGTGTTTGCAAGGGGACAAGGAATTGAGACCCTCTATGGGTGAAGTGTTGGAGGTGCTTCAGGGGATTCAAAGTGGATTTGATGAGCCAGGGAATCTTGAGGGAATTGTAGTTCATGGTGCTACTAGGGCTTCACAGAGCTATGCTCATCCACCTCTTTCAAACACTGTGATGAGGCCACATCCACGCCTTCACCAAACACACTGA 1359 0.457 MAAYSMFGFHFLRSCFMLLVLAAAQKDENYEECLVSQPCGYLGDINFPFTTRPRCGLLQIEGCEDPGAVKKIQLTTDPQRYQIDTLLNIASPEYRSIFIHRTEYPDPFASKTLKPYFKIINNISFFRCTSDLNILNHTMSLYRKCPSYYIYFNFSSEYEHGVPTHLLPFRMPILPFACLLNQFPPINQVSVPTCPSCTFLFSFLEIKRKKPSGLKNQTRSAYSASFIESGAVYFGIPIFSYEELQKATNNFDQARELGEGGFGTVYYGKLADQREVAVKRLFERNYRPVESFINEIQILTRLRHQNLVPLYGCTSRHSRELLLVYEYIPNGTVNSHLHGDQAKPCSLPWLIQKGAFCDLVDPFLGFQTDEKLKRMIVSVAELAFQCLQGDKELRPSMGEVLEVLQGIQSGFDEPGNLEGIVVHGATRASQSYAHPPLSNTVMRPHPRLHQTH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0760 452 Pfam Protein tyrosine and serine/threonine kinase 254 352 IPR001245 GO:0004672|GO:0006468
Aed11g0760 452 Gene3D Phosphorylase Kinase; domain 1 228 327 - -
Aed11g0760 452 SUPERFAMILY Protein kinase-like (PK-like) 230 353 IPR011009 -
Aed11g0760 452 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 198 351 - -
Aed11g0760 452 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 351 418 - -
Aed11g0760 452 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 198 351 IPR044652 -
Aed11g0760 452 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Aed11g0760 452 ProSiteProfiles Protein kinase domain profile. 251 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0760 452 MobiDBLite consensus disorder prediction 431 452 - -
Aed11g0760 452 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 351 418 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0760 Aed-Chr11 10919640 10922508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0760 351 409 Receptor kinase-like Gene Family AT1G25390 49.153 2.23e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed11g0760 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0760 11 10919640 10922508 Aed11g0760 11 10919640 10922508 ECH