Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0664 ATGGGACCTCTCATTTACTATCTCTTCCCACTCTTCCTTCTCTTTGCTTCAACGCACTCCCGAACCACACCACACACAGACACTCCCAAAACGACACTCCTCGACGTCGTTTCTTCCCTTCAAAACGCACACAATGTCATTGCCTCCGCCTCGGTACATTACCACTCGAACAAACGACAACAAGAACGGCCGCCTTTAACGTCGTTCGGTGTTCACTTACATCCCCGAGCGTCAATTCAGAAACCTTCACATTCACACAGAGACTACGAATCGTTAACCATAGCGCGACTCGCTCGCGACTCAGCCCGAGTTAAGGCCTTACAGACTCGTTTGGATCTCGTTCTGAAACGCGTCTCGAACTCGGATCTCCACCCGGCCGAGTCAGGCTCGGAGTTCGAGTCCAACGCGCTGCAAGGCCCAATCGTCTCCGGAACGAGTCAGGGAAGCGGTGAGTACTTCCTCCGAGTCGGAATCGGAAAGCCACCGAGTCAAGCCTACGTGGTGCTCGACACAGGAAGCGACGTGAGTTGGATCCAATGCGCTCCGTGCTCCGCATGCTACCAACAATCCGACCCGATTTTCGACCCGGTTTCGTCGTCTTCGTACTCCACGATCCACTGCGACGCGCCGCAGTGTAAGTCACTGGACCTCTCCGAGTGCCGCAACGGAACGTGCCTCTACGAAGTCTCCTACGGCGACGGATCCTACACCGTCGGAGAATTCGCCACGGAGACGGTGACTCTCGGTGCGGCGGCGGTGGAGAAAGTCGCTATCGGCTGCGGCCACAACAACGAAGGACTGTTCGTCGGCGCCGCCGGTTTACTCGGCCTTGGCGGCGGAAAGCTCTCTTTCCCGGCGCAGGTCAACGCGACGTCGTTCTCCTACTGCCTCGTGGACCGCGACTCCGACGCCGTTTCGACTCTCGAGTTCAACACTCCGTTTCCGCGAAACGCCGTCACCGCGCCGTTGATGCGGAACCCCGAGCTCGACACGTTCTACTACCTCGGTTTGAAGGGAATCAGCGTCGGCGGCGACGCTATTCCGGTTCCGGAATCGAGCTTTGCTGTCGACGCCATCGGCGGCGGAGGTATTATCGTCGATTCCGGCACGGCGGTGACGCGGCTGCGGAGTGACGTCTACGACGCGCTTCGCGACGCGTTTGTGAAGGAGACGAAGGCGCTGCCGAAGGCGAACGGCGTGTCGTTGTTCGACACGTGCTACGACTTGTCGTCGAGGGAGAGTGTGGAGGTTCCCACGGTGTCGTTTCACTTTCCCGAGGGGAGGGAGTTACCGTTACCAGCGAGTAATTACCTGATACCGGTTGACTCGGTGGGAACGTTCTGTTTCGCTTTCGCGCCCACGACGTCGTCGCTGTCAATCATTGGGAACGTGCAGCAGCAAGGGACACGTGTCGGTTTCGATATCGCGAACTCGCTCGTTGGATTCTCTGCTAATAGCTGTTAG 1464 0.5806 MGPLIYYLFPLFLLFASTHSRTTPHTDTPKTTLLDVVSSLQNAHNVIASASVHYHSNKRQQERPPLTSFGVHLHPRASIQKPSHSHRDYESLTIARLARDSARVKALQTRLDLVLKRVSNSDLHPAESGSEFESNALQGPIVSGTSQGSGEYFLRVGIGKPPSQAYVVLDTGSDVSWIQCAPCSACYQQSDPIFDPVSSSSYSTIHCDAPQCKSLDLSECRNGTCLYEVSYGDGSYTVGEFATETVTLGAAAVEKVAIGCGHNNEGLFVGAAGLLGLGGGKLSFPAQVNATSFSYCLVDRDSDAVSTLEFNTPFPRNAVTAPLMRNPELDTFYYLGLKGISVGGDAIPVPESSFAVDAIGGGGIIVDSGTAVTRLRSDVYDALRDAFVKETKALPKANGVSLFDTCYDLSSRESVEVPTVSFHFPEGRELPLPASNYLIPVDSVGTFCFAFAPTTSSLSIIGNVQQQGTRVGFDIANSLVGFSANSC 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0664 487 Pfam Xylanase inhibitor C-terminal 333 483 IPR032799 -
Aed11g0664 487 PANTHER ASPARTYL PROTEASES 9 487 IPR001461 GO:0004190|GO:0006508
Aed11g0664 487 CDD cnd41_like 151 487 IPR033873 -
Aed11g0664 487 ProSiteProfiles Peptidase family A1 domain profile. 152 483 IPR033121 -
Aed11g0664 487 Pfam Xylanase inhibitor N-terminal 152 309 IPR032861 -
Aed11g0664 487 SUPERFAMILY Acid proteases 145 487 IPR021109 -
Aed11g0664 487 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 487 - -
Aed11g0664 487 Gene3D Acid Proteases 126 309 IPR021109 -
Aed11g0664 487 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 167 178 IPR001969 GO:0004190|GO:0006508
Aed11g0664 487 Gene3D Acid Proteases 310 487 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0664 Aed-Chr11 7131753 7133216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0664 142 487 Miscellaneous Gene Families AT1G77480 25.130 1.59e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0664 11 7131753 7133216 Aed11g0664 11 7131753 7133216 ECH