Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0644 ATGGCCACTGTTGCAACTACAGGAATTGGAGTAGGAGTGGCAAAGCTCCAACAACCCCAAAAGCCAAAGCACAACAACAGCAATAACAAGTCCTTGTTCCTTGGCCATAGGCTTAGGAATATTAGACCCTCTTGGGTGGAGACTCATAAATGCTGTAGTGAAAGAAGATTGGTTCAAGTTTTTGCACTAGGAGGTGGTGAGTGGCTTGACACAGTTCACAGCCTCTTTGTGGGTGTTGGGGTTGGGCTTCCATGCAGTGTGATGCAGTGTGGGGATGTGATCTATAGAAGCACTCTTCCTAAAGCCAATGGTTTGACACTCACTGTCCCTGGGGTCATTCTGGCTCTGGGGACTCTTTCTTATCTCTGGGCCACACCTGGTGTTGCACCTGGCTTCTTTGACATGTTTGAAGGTGACTTAGTCTTGAAGAAAGCAACTGAATATGGTGCTGTAGAAATTTGGATGAACGAGCGTGTACGGCGAGCTTGTGCAAGCAGCTGCGCAGATTTTGTCTATGGTTTTCTTGAGAGCTCTTCAAAGAAGACTTCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGATGCAGAGTAGAGACTTTCCATATAATGTTGAAACATTAATTCTGGGTGAGGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAACAGAATCATTCAAACAATCATGAGGCAGGTCTTGTTTGCACTGGATGGTCTTCACTCAACTGGAATTGTACACAGGGATATTAAGCCACAGAACATTATTTTCTCAGAAGAGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTACAGATCTGCGAGTTGGCATCAACTATATTCCTAAAGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAACAGTACATCATGAGCACACAAACTCCATCAGCACCCTCAGTTCCCGTTGCAGCTGCACTTTCGCCAGTCTTATGGCAGGCATTCCCCAGTTTACGTTCTGATAACAGCCTCATACAATTCAACCGTCAATTAAAGAGGTGTGACTATGACTTGGTGGCGTGGAGAAAATCTGCGGAGCCTCGATCCGAACTTAGGAAGGGCTTTGACTTGTTGGATTTGGATGGTGGATGGGAGCTTCTGACATCAATGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAACACTGAGGCTGCAGCTCTTGCGTGCAACTCAGCAGGATTATTCGGAAGCCGCCCAATGGATTATTCAGCTGATGGCAAAATCAGGGACACAGAAGGATGGTGGATTCACTGA 1299 0.4588 MATVATTGIGVGVAKLQQPQKPKHNNSNNKSLFLGHRLRNIRPSWVETHKCCSERRLVQVFALGGGEWLDTVHSLFVGVGVGLPCSVMQCGDVIYRSTLPKANGLTLTVPGVILALGTLSYLWATPGVAPGFFDMFEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKTSEYWLIWRFEGDATLADLMQSRDFPYNVETLILGEVQDLPKGLERENRIIQTIMRQVLFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVAAALSPVLWQAFPSLRSDNSLIQFNRQLKRCDYDLVAWRKSAEPRSELRKGFDLLDLDGGWELLTSMRRLVGIVFHANTEAAALACNSAGLFGSRPMDYSADGKIRDTEGWWIH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0644 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Aed11g0644 432 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 137 387 - -
Aed11g0644 432 ProSiteProfiles Protein kinase domain profile. 73 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0644 432 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 137 387 IPR044803 GO:0004674|GO:0009579
Aed11g0644 432 SMART serkin_6 139 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0644 432 Pfam Protein kinase domain 228 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0644 432 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 19 136 IPR044803 GO:0004674|GO:0009579
Aed11g0644 432 Gene3D Transferase(Phosphotransferase) domain 1 219 390 - -
Aed11g0644 432 SUPERFAMILY Protein kinase-like (PK-like) 195 307 IPR011009 -
Aed11g0644 432 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 19 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0644 Aed-Chr11 6681502 6686253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0644 197 363 CBL-interacting serine-threonine protein kinases AT4G30960 26.437 4.99e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aed11g0644 Pkinase 1.4e-17 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0644 11 6681502 6686253 Aed11g0644 11 6681502 6686253 ECH