Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0636 ATGATTTATACAGATAAAGCTTCATTACTAGCAGAAGTGATTCAGCACGTGAAGGAGCTGAAGCGCCAAACCTCCCTCATAGCAGAAACGAGTCCAGTGCCAACCGAGTCAGACGAGTTAACGGTGGATGCAGTCGATCACGATCACGAACCCGGAAAGTTCGTGATCAAAGCCTCGCTGTGTTGTGAGGATAGGTCGGATCTCTTATCCGACCTAATCAAGACGCTCAAGGCGATGAGGCTGAGAACTCTCAAGGCCGAGATCACGTCCCTCGGCGGACGCGTGAAGAACGTGTTGGTCATAACCGGCGACGACGAAGTAGAAGAAGAAGGTGATTCGAACGACGCCAATGGCAGAGAACAAGCCATGCAGATGCAGCAGCAGCAGCAACGGTATTGTATTAGATCGATACAAGAAGCACTTAAGGCTGTGATGGAGAAGAGTGGTGGTGGGGATCATGAATCAGCTTCTGGGAATGTTAAGCGCCAAAAGACTAGTAATAATATCAATATCCTTGAACAAAGGTCCTTATGA 534 0.485 MIYTDKASLLAEVIQHVKELKRQTSLIAETSPVPTESDELTVDAVDHDHEPGKFVIKASLCCEDRSDLLSDLIKTLKAMRLRTLKAEITSLGGRVKNVLVITGDDEVEEEGDSNDANGREQAMQMQQQQQRYCIRSIQEALKAVMEKSGGGDHESASGNVKRQKTSNNINILEQRSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0636 177 PANTHER TRANSCRIPTION FACTOR BHLH30 4 172 IPR045847 GO:0003700|GO:0006355
Aed11g0636 177 MobiDBLite consensus disorder prediction 160 177 - -
Aed11g0636 177 PANTHER TRANSCRIPTION FACTOR BHLH30 4 172 - -
Aed11g0636 177 CDD ACT_UUR-ACR-like 59 105 - -
Aed11g0636 177 MobiDBLite consensus disorder prediction 145 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0636 Aed-Chr11 6601461 6602106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0636 4 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 59.429 6.03e-58 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0636 11 6601461 6602106 Aed11g0636 11 6601461 6602106 ECH