Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0634 ATGAAAGTACATACATCCTCCGCATTCCCAAAACGCGTAGCCTCAACAGTCATCATTCATCAACCATCTTCTGAAACTCTCTCTTTCTTTCATCTTCTTCAACTTCATCATTCTCTCTCTCCCTCCTTCAACAATGTCATCACACCTCTCTTTCTTCTTCCTCTTTCTCCTCCTCCTACCACATTCCTCCACTTCAGCGGAGGAGGACCATTTCCTCAAGCTCCCCTTACTCCCTCCGACCACCATCCCCTCTCCCTCCCATCTCTTAGCTTCCGACCTCCGCCGCCTCTCCGGCCTCCCCCGCTCCCCCCTCACCTCTGGTGCCTCCACCGGGTCCGGGCAGTACTTCACCCTCCTCCACCTCGGCTCCCCTCCCCAACCCCTCCTCCTCGTCGCCGACACCGGCAGCGACCTCGTCTGGGTCAAATGCTCCGCCTGCCGCCAAAACCAAAACTGCTCCTCCCCCACTCCCCACCACACCTTCCTCCCCCGCCACTCCAAATCCTTCTCCTCCCACCACTGCTACGACTCGCCGTGTCAACTCATCCCCACCCGTCCCACACCAAACACTGCAACAACCGCTCCAAACTCCACACCCCGTGCCACTACCAATACTCCTACTCCGACGGCTCCACCACCTCCGGCTTCTTCTCCAAAGAAACCTTAACCTTCACCAACACCACCAACACTACAACAACATTCTCCCCCATTACCTTCGGCTGCGGCTTTAAAACCTCAGGCCCAAGCGTAACGGGCCAGGCCTTCAACGGCGTTTTGGGCCTGGGCCGCGGCCCGATCTCCTTCACCTCCCAACTCACCCGCAAACTCAAAAACTCTAGAAACACCTTCTCATACTGCCTCCTCGACTACACTCTCTCCCCACCCCCAACTAGCTACCTCACCATCGGATCCACAAAAAACGACGTCGTTTCGCGAAACAAATTCTCCTTCACGCCATTACTCACAAACCCTCTTTCTCCCTCGTTCTACTACATCTCCATCGAGAGCGTTTCCGTCGACGGCGCTATCTTACCGATAAGCGAATCCGTTTGGAGGATCGACAGTGACGGTAACGGCGGCACCGTCGTGGACTCCGGAACCACGCTCACTTTCCTCGCCGAGCCGGCTTACGGACTTATTCTGGCTGCGTTCCGCCGCCGCGTGAGGCTTCCGGCTGTGGAAAGCGTTTCCCTCGGGTTCGATCTTTGCGTGAACGTCTCCGCCGTTGCGAGGCCGAAGCTGCCGCGGCTGAGATTTTACCTCGCCGGGAAAGCGATTCTGTCGCCGCCGATGGGAAATTATTTCATCGAGGTGACGGAGGGAGTGAAGTGTCTCGCGGTTCAGCCGGCTCGGCCGGGTGCGGGGTTTTCTGTTATCGGGAATCTAATGCAGCAAGGGTACTTGTTTGAGTTTGATTTGGACCGGTCGCGGATCGGGTTCACGCGTCACGGATGCGCGGTTCGCTAA 1467 0.5712 MKVHTSSAFPKRVASTVIIHQPSSETLSFFHLLQLHHSLSPSFNNVITPLFLLPLSPPPTTFLHFSGGGPFPQAPLTPSDHHPLSLPSLSFRPPPPLRPPPLPPHLWCLHRVRAVLHPPPPRLPSPTPPPRRRHRQRPRLGQMLRLPPKPKLLLPHSPPHLPPPPLQILLLPPLLRLAVSTHPHPSHTKHCNNRSKLHTPCHYQYSYSDGSTTSGFFSKETLTFTNTTNTTTTFSPITFGCGFKTSGPSVTGQAFNGVLGLGRGPISFTSQLTRKLKNSRNTFSYCLLDYTLSPPPTSYLTIGSTKNDVVSRNKFSFTPLLTNPLSPSFYYISIESVSVDGAILPISESVWRIDSDGNGGTVVDSGTTLTFLAEPAYGLILAAFRRRVRLPAVESVSLGFDLCVNVSAVARPKLPRLRFYLAGKAILSPPMGNYFIEVTEGVKCLAVQPARPGAGFSVIGNLMQQGYLFEFDLDRSRIGFTRHGCAVR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0634 488 CDD pepsin_A_like_plant 201 485 IPR034161 -
Aed11g0634 488 ProSiteProfiles Peptidase family A1 domain profile. 153 481 IPR033121 -
Aed11g0634 488 PANTHER BNAA02G27600D PROTEIN 183 487 - -
Aed11g0634 488 MobiDBLite consensus disorder prediction 73 92 - -
Aed11g0634 488 SUPERFAMILY Acid proteases 180 485 IPR021109 -
Aed11g0634 488 Gene3D Acid Proteases 162 303 IPR021109 -
Aed11g0634 488 PANTHER OS07G0603500 PROTEIN-RELATED 183 487 - -
Aed11g0634 488 MobiDBLite consensus disorder prediction 118 143 - -
Aed11g0634 488 Pfam Xylanase inhibitor C-terminal 330 481 IPR032799 -
Aed11g0634 488 Gene3D Acid Proteases 304 487 IPR021109 -
Aed11g0634 488 Pfam Xylanase inhibitor N-terminal 188 304 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0634 Aed-Chr11 6522494 6523960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0634 198 485 Miscellaneous Gene Families AT1G77480 25.574 8.85e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0634 11 6522494 6523960 Aed11g0634 11 6522494 6523960 ECH